ORUFI04G20430 (Oryza rufipogon)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 ORUFI04G20430 T020551_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF16
M06708_2.00
Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA

TTTTYCCGCCAAAAMCGTAAA
Dap-seq
OMalley et al.(2016)
ARF16_col_b
0.772 0.772
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI04G20430.1 B3 118 215

Links

Other B3 family TFs
Other Oryza rufipogon TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.978
ARF10 Oryza indica BGIOSGA016767 I 0.978
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.978
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.978
OS04G0519700 Oryza sativa OS04G0519700 I 0.978
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.978
OBART04G18910 Oryza barthii OBART04G18910 I 0.978
OPUNC04G16630 Oryza punctata OPUNC04G16630 I 0.918
OB04G25990 Oryza brachyantha OB04G25990 I 0.859
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.848
Si009541m.g Setaria italica Si009541m.g I 0.815
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.802
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.802
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.793
ARF18 Oryza sativa OS06G0685700 I 0.793
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.793
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.793
Si005991m.g Setaria italica Si005991m.g I 0.793
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.793
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.793
OB06G32920 Oryza brachyantha OB06G32920 I 0.793
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.793
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.793
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.793
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.793
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.793
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.793
OBART06G25230 Oryza barthii OBART06G25230 I 0.793
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.793
mgf005300m Mimulus guttatus mgf005300m I 0.783
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.783
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.783
OLONG_014659 Oryza longistaminata OLONG_014659 N 0.783
ARF16 Arabidopsis thaliana AT4G30080 D 0.772
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.772
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.772
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.772
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.772
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.772
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.772
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.772
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.772
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.772
Pm031275 Prunus mume Pm031275 I 0.772
27538.m000327 Ricinus communis 27538.m000327 I 0.772
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.772
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.772
Ca_26121 Cicer arietinum Ca_26121 I 0.772
Ca_02541 Cicer arietinum Ca_02541 I 0.772
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.772
ARF8 Oryza sativa OS02G0628600 I 0.772
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.772
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.772
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.772
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.772
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.772
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.772
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.772
OB02G32150 Oryza brachyantha OB02G32150 I 0.772
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.772
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.772
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.772
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.772
MDP0000131481 Malus domestica MDP0000131481 I 0.772
MDP0000221322 Malus domestica MDP0000221322 I 0.772
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.772
Bra011162 Brassica rapa Bra011162 I 0.772
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.772
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.772
Bo7g114200 Brassica oleracea Bo7g114200 I 0.772
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.772
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.772
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.772
TCM_043157 Theobroma cacao TCM_043157 I 0.761
TCM_042067 Theobroma cacao TCM_042067 I 0.761
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.761
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.761
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.761
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.761
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.761
Si016509m.g Setaria italica Si016509m.g I 0.761
Si034525m.g Setaria italica Si034525m.g I 0.761
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.761
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.761
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.761
Cla018574 Citrullus lanatus Cla018574 I 0.761
Pm030120 Prunus mume Pm030120 I 0.761
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.761
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.761
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.761
F775_32978 Aegilops tauschii F775_32978 I 0.761
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.761
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.761
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.761
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.761
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.761
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.761
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.761
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.761
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.761
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.761
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.761
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.761
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.761
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.761
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.761
OBART10G13410 Oryza barthii OBART10G13410 I 0.761
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.761
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.761
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.761
ARF10 Arabidopsis thaliana AT2G28350 I 0.761
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.761
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.761
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.761
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.761
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.761
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.761
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.761
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.761
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.761
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.761
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.761
ARF22 Oryza sativa OS10G0479900 I 0.761
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.761
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.761
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.761
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.750
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.750
PK17007.1 Cannabis sativa PK17007.1 I 0.750
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.750
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.750
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.750
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.750
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.750
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.750
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.750
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.750
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.750
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.750
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.750
mgf024607m Mimulus guttatus mgf024607m I 0.750
Cla013979 Citrullus lanatus Cla013979 I 0.750
TCM_022163 Theobroma cacao TCM_022163 I 0.750
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.750
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.750
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.750
Bra011955 Brassica rapa Bra011955 I 0.750
Bo4g071620 Brassica oleracea Bo4g071620 I 0.750
OB10G20590 Oryza brachyantha OB10G20590 I 0.750
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.750
30078.m002329 Ricinus communis 30078.m002329 I 0.750
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.750
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.742
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.739
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.739
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.739
MDP0000750392 Malus domestica MDP0000750392 I 0.739
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.739
Ca_17136 Cicer arietinum Ca_17136 I 0.739
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.739
27494.m000045 Ricinus communis 27494.m000045 I 0.739
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.739
Bra024109 Brassica rapa Bra024109 I 0.732
Pm018533 Prunus mume Pm018533 I 0.732
mgf016139m Mimulus guttatus mgf016139m I 0.729
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.729
estExt_fgenesh1_pm.C_3390006 Physcomitrella patens estExt_fgenesh1_pm.C_3390006 I 0.728
Cla008883 Citrullus lanatus Cla008883 I 0.728
mgf000336m Mimulus guttatus mgf000336m I 0.728
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.728
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.728
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.728
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.726
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.722
Traes_6DL_52A25BEA4 Triticum aestivum Traes_6DL_52A25BEA4 I 0.722
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.722
Bo1g014600 Brassica oleracea Bo1g014600 I 0.722
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.719
Lus10023519.g Linum usitatissimum Lus10023519.g I 0.717
SELMODRAFT_443304 Selaginella moellendorffii SELMODRAFT_443304 I 0.717
SELMODRAFT_444549 Selaginella moellendorffii SELMODRAFT_444549 I 0.717
Lus10040403.g Linum usitatissimum Lus10040403.g I 0.717
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.717
PK13064.1 Cannabis sativa PK13064.1 I 0.711
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.711
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.711
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.711
Pm019126 Prunus mume Pm019126 I 0.707
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.707
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.701