ORUFI05G24090 (Oryza rufipogon)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 ORUFI05G24090 T020560_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF3
M00852_2.00
Arabidopsis thaliana
NKGTYBNN

NNVRACMN
PBM
Franco-Zorrilla et al.(2014)
ETTIN
0.867 0.867
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI05G24090.1 B3 133 247

Links

Other B3 family TFs
Other Oryza rufipogon TFs

226 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_02482 Aegilops tauschii F775_02482 I 0.878
F775_20129 Aegilops tauschii F775_20129 I 0.710
F775_06493 Aegilops tauschii F775_06493 I 0.750
AMTR_s00021p00200760 Amborella trichopoda AMTR_s00021p00200760 I 0.847
AMTR_s00034p00110140 Amborella trichopoda AMTR_s00034p00110140 I 0.847
AMTR_s00057p00141830 Amborella trichopoda AMTR_s00057p00141830 I 0.704
Aquca_036_00025 Aquilegia coerulea Aquca_036_00025 I 0.847
Aquca_051_00062 Aquilegia coerulea Aquca_051_00062 I 0.867
Aquca_008_00175 Aquilegia coerulea Aquca_008_00175 I 0.717
Aquca_027_00067 Aquilegia coerulea Aquca_027_00067 I 0.827
ETT Arabidopsis lyrata scaffold_401977.1 I 0.867
ARF4 Arabidopsis lyrata fgenesh2_kg.8__2008__AT5G60450.1 I 0.818
ARF4 Arabidopsis thaliana AT5G60450 I 0.837
ARF3 Arabidopsis thaliana AT2G33860 D 0.867
Bostr.26833s0196 Boechera stricta Bostr.26833s0196 I 0.847
Bostr.23794s0705 Boechera stricta Bostr.23794s0705 I 0.867
BRADI2G16610 Brachypodium distachyon BRADI2G16610 I 0.888
BRADI2G19867 Brachypodium distachyon BRADI2G19867 I 0.908
BRADI2G46190 Brachypodium distachyon BRADI2G46190 I 0.857
BRADI2G50120 Brachypodium distachyon BRADI2G50120 I 0.867
Bo4g041340 Brassica oleracea Bo4g041340 I 0.867
Bo4g182310 Brassica oleracea Bo4g182310 I 0.867
Bo9g143570 Brassica oleracea Bo9g143570 I 0.827
Bo2g024860 Brassica oleracea Bo2g024860 I 0.827
Bra021885 Brassica rapa Bra021885 I 0.867
Bra002479 Brassica rapa Bra002479 I 0.827
Bra005465 Brassica rapa Bra005465 I 0.867
PK12669.1 Cannabis sativa PK12669.1 I 0.714
PK07904.1 Cannabis sativa PK07904.1 I 0.837
PK18282.1 Cannabis sativa PK18282.1 I 0.857
Cagra.2519s0017 Capsella grandiflora Cagra.2519s0017 I 0.847
Cagra.1195s0014 Capsella grandiflora Cagra.1195s0014 I 0.867
Carubv10025912m.g Capsella rubella Carubv10025912m.g I 0.847
Carubv10025185m.g Capsella rubella Carubv10025185m.g I 0.867
evm.TU.supercontig_139.80 Carica papaya evm.TU.supercontig_139.80 I 0.827
evm.TU.supercontig_7.3 Carica papaya evm.TU.supercontig_7.3 I 0.837
Ca_06352 Cicer arietinum Ca_06352 I 0.847
Ca_14590 Cicer arietinum Ca_14590 I 0.784
Cla000568 Citrullus lanatus Cla000568 I 0.755
Cla009812 Citrullus lanatus Cla009812 I 0.837
Cla019614 Citrullus lanatus Cla019614 I 0.704
Ciclev10014391m.g Citrus clementina Ciclev10014391m.g I 0.847
Ciclev10027839m.g Citrus clementina Ciclev10027839m.g I 0.837
Ciclev10000976m.g Citrus clementina Ciclev10000976m.g I 0.816
orange1.1g003580m.g Citrus sinensis orange1.1g003580m.g I 0.837
orange1.1g012439m.g Citrus sinensis orange1.1g012439m.g I 0.816
orange1.1g004106m.g Citrus sinensis orange1.1g004106m.g I 0.847
Cucsa.117420 Cucumis sativus Cucsa.117420 I 0.712
Cucsa.052860 Cucumis sativus Cucsa.052860 I 0.781
Cucsa.046570 Cucumis sativus Cucsa.046570 I 0.837
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I 0.714
Eucgr.D00588 Eucalyptus grandis Eucgr.D00588 I 0.838
Eucgr.B03551 Eucalyptus grandis Eucgr.B03551 I 0.704
Eucgr.B02480 Eucalyptus grandis Eucgr.B02480 I 0.837
Thhalv10012074m.g Eutrema salsugineum Thhalv10012074m.g I 0.745
Thhalv10012728m.g Eutrema salsugineum Thhalv10012728m.g I 0.837
Thhalv10016394m.g Eutrema salsugineum Thhalv10016394m.g I 0.867
gene28545-v1.0-hybrid Fragaria vesca gene28545-v1.0-hybrid I 0.827
gene29771-v1.0-hybrid Fragaria vesca gene29771-v1.0-hybrid I 0.857
GLYMA07G32300 Glycine max GLYMA07G32300 I 0.847
GLYMA11G15910 Glycine max GLYMA11G15910 I 0.837
GLYMA12G07560 Glycine max GLYMA12G07560 I 0.847
GLYMA12G29280 Glycine max GLYMA12G29280 I 0.837
GLYMA13G30750 Glycine max GLYMA13G30750 I 0.857
GLYMA18G11274 Glycine max GLYMA18G11274 I 0.724
GLYMA13G40310 Glycine max GLYMA13G40310 I 0.793
GLYMA16G00220 Glycine max GLYMA16G00220 I 0.722
GLYMA15G08540 Glycine max GLYMA15G08540 I 0.847
GLYMA13G24240 Glycine max GLYMA13G24240 I 0.847
Gorai.011G030900 Gossypium raimondii Gorai.011G030900 I 0.847
Gorai.009G078800 Gossypium raimondii Gorai.009G078800 I 0.796
Gorai.009G166100 Gossypium raimondii Gorai.009G166100 I 0.837
Gorai.010G157400 Gossypium raimondii Gorai.010G157400 I 0.857
Gorai.006G120400 Gossypium raimondii Gorai.006G120400 I 0.837
MLOC_66439 Hordeum vulgare MLOC_66439 I 0.878
MLOC_38232 Hordeum vulgare MLOC_38232 I 0.929
LPERR05G18660 Leersia perrieri LPERR05G18660 I 0.949
LPERR01G26810 Leersia perrieri LPERR01G26810 I 0.888
LPERR01G22260 Leersia perrieri LPERR01G22260 I 0.804
LPERR05G21420 Leersia perrieri LPERR05G21420 I 0.878
Lus10013942.g Linum usitatissimum Lus10013942.g I 0.857
Lus10005264.g Linum usitatissimum Lus10005264.g I 0.857
LjSGA_022975.2 Lotus japonicus LjSGA_022975.2 I 0.712
LjSGA_030678.1 Lotus japonicus LjSGA_030678.1 I 0.700
LjSGA_059669.1 Lotus japonicus LjSGA_059669.1 I 0.857
LjSGA_103336.1 Lotus japonicus LjSGA_103336.1 I 0.867
chr2.CM0201.60.nd Lotus japonicus chr2.CM0201.60.nd I 0.730
chr3.CM0111.110.nd Lotus japonicus chr3.CM0111.110.nd I 0.816
LjSGA_022281.1 Lotus japonicus LjSGA_022281.1 I 0.722
MDP0000929655 Malus domestica MDP0000929655 I 0.722
MDP0000179650 Malus domestica MDP0000179650 I 0.857
MDP0000173151 Malus domestica MDP0000173151 I 0.857
MDP0000225980 Malus domestica MDP0000225980 I 0.816
MDP0000412781 Malus domestica MDP0000412781 I 0.816
cassava1599.valid.m1 Manihot esculenta cassava1599.valid.m1 I 0.857
cassava37256.valid.m1 Manihot esculenta cassava37256.valid.m1 I 0.704
cassava6009.valid.m1 Manihot esculenta cassava6009.valid.m1 I 0.827
cassava830.valid.m1 Manihot esculenta cassava830.valid.m1 I 0.847
MTR_2g014770 Medicago truncatula MTR_2g014770 I 0.857
MTR_2g005240 Medicago truncatula MTR_2g005240 I 0.722
MTR_4g060460 Medicago truncatula MTR_4g060460 I 0.784
MTR_2g093740 Medicago truncatula MTR_2g093740 I 0.837
MTR_4g088210 Medicago truncatula MTR_4g088210 I 0.857
mgf011102m Mimulus guttatus mgf011102m I 0.816
mgf016063m Mimulus guttatus mgf016063m I 0.867
GSMUA_Achr6G08090_001 Musa acuminata GSMUA_Achr6G08090_001 I 0.714
GSMUA_Achr10G26140_001 Musa acuminata GSMUA_Achr10G26140_001 I 0.776
GSMUA_Achr3G31350_001 Musa acuminata GSMUA_Achr3G31350_001 I 0.857
GSMUA_Achr4G02750_001 Musa acuminata GSMUA_Achr4G02750_001 I 0.794
GSMUA_Achr4G10590_001 Musa acuminata GSMUA_Achr4G10590_001 I 0.814
GSMUA_Achr10G12070_001 Musa acuminata GSMUA_Achr10G12070_001 I 0.704
GSMUA_Achr7G11000_001 Musa acuminata GSMUA_Achr7G11000_001 I 0.796
GSMUA_Achr7G25330_001 Musa acuminata GSMUA_Achr7G25330_001 I 0.878
OBART01G31160 Oryza barthii OBART01G31160 I 0.878
OBART01G26040 Oryza barthii OBART01G26040 I 0.804
OBART05G22670 Oryza barthii OBART05G22670 I 0.990
OBART05G25790 Oryza barthii OBART05G25790 I 0.878
OB01G40150 Oryza brachyantha OB01G40150 I 0.888
OB01G35190 Oryza brachyantha OB01G35190 I 0.776
OB05G30280 Oryza brachyantha OB05G30280 I 0.969
OB05G33320 Oryza brachyantha OB05G33320 I 0.816
OB12G20020 Oryza brachyantha OB12G20020 I 0.704
ORGLA05G0222700 Oryza glaberrima ORGLA05G0222700 I 0.878
ORGLA05G0198900 Oryza glaberrima ORGLA05G0198900 I 0.990
ORGLA01G0213000 Oryza glaberrima ORGLA01G0213000 I 0.804
OGLUM01G35360 Oryza glumaepatula OGLUM01G35360 I 0.878
OGLUM01G29850 Oryza glumaepatula OGLUM01G29850 I 0.804
OGLUM05G23980 Oryza glumaepatula OGLUM05G23980 I 0.990
OGLUM05G27420 Oryza glumaepatula OGLUM05G27420 I 0.878
BGIOSGA000812 Oryza indica BGIOSGA000812 I 0.878
BGIOSGA020357 Oryza indica BGIOSGA020357 I 0.878
BGIOSGA001046 Oryza indica BGIOSGA001046 I 0.804
OLONG_019459 Oryza longistaminata OLONG_019459 I 0.878
OLONG_023172 Oryza longistaminata OLONG_023172 I 0.804
OMERI05G20390 Oryza meridionalis OMERI05G20390 I 0.990
OMERI01G28330 Oryza meridionalis OMERI01G28330 I 0.878
OMERI01G23690 Oryza meridionalis OMERI01G23690 I 0.804
ONIVA05G27700 Oryza nivara ONIVA05G27700 I 0.878
ONIVA01G29290 Oryza nivara ONIVA01G29290 I 0.804
ONIVA01G35630 Oryza nivara ONIVA01G35630 I 0.878
ONIVA05G23630 Oryza nivara ONIVA05G23630 I 0.990
OPUNC05G23400 Oryza punctata OPUNC05G23400 I 0.878
OPUNC05G23380 Oryza punctata OPUNC05G23380 I 0.878
OPUNC05G20300 Oryza punctata OPUNC05G20300 I 0.969
OPUNC01G30260 Oryza punctata OPUNC01G30260 I 0.867
OPUNC01G25930 Oryza punctata OPUNC01G25930 I 0.804
ORUFI01G28960 Oryza rufipogon ORUFI01G28960 I 0.804
ORUFI05G27690 Oryza rufipogon ORUFI05G27690 I 0.867
ORUFI01G34340 Oryza rufipogon ORUFI01G34340 I 0.878
ARF15 Oryza sativa OS05G0563400 I 0.867
OS05G0515400 Oryza sativa OS05G0515400 I 1.000
ARF3 Oryza sativa OS01G0753500 I 0.878
OS01G0670800 Oryza sativa OS01G0670800 I 0.804
Pavir.J08401 Panicum virgatum Pavir.J08401 I 0.878
Pavir.J17623 Panicum virgatum Pavir.J17623 I 0.823
Pavir.J38128 Panicum virgatum Pavir.J38128 I 0.816
Pavir.J35323 Panicum virgatum Pavir.J35323 I 0.814
Pavir.Ab01961 Panicum virgatum Pavir.Ab01961 I 0.705
Pavir.J17853 Panicum virgatum Pavir.J17853 I 0.854
Pavir.Eb02716 Panicum virgatum Pavir.Eb02716 I 0.806
Pavir.Eb03157 Panicum virgatum Pavir.Eb03157 I 0.854
Pavir.Ca00928 Panicum virgatum Pavir.Ca00928 I 0.867
PDK_20s1585531g001 Phoenix dactylifera PDK_20s1585531g001 I 0.704
PDK_20s1465161g002 Phoenix dactylifera PDK_20s1465161g002 I 0.878
PDK_20s1421941g001 Phoenix dactylifera PDK_20s1421941g001 I 0.758
PDK_20s1663351g001 Phoenix dactylifera PDK_20s1663351g001 I 0.878
estExt_Genewise1.C_2800001 Physcomitrella patens estExt_Genewise1.C_2800001 I 0.742
e_gw1.64.107.1 Physcomitrella patens e_gw1.64.107.1 I 0.714
estExt_Genewise1.C_140304 Physcomitrella patens estExt_Genewise1.C_140304 I 0.732
gw1.341.65.1 Physcomitrella patens gw1.341.65.1 I 0.742
POPTR_0011s05830 Populus trichocarpa POPTR_0011s05830 I 0.867
POPTR_0004s04970 Populus trichocarpa POPTR_0004s04970 I 0.867
POPTR_0009s01700 Populus trichocarpa POPTR_0009s01700 I 0.827
POPTR_0004s23770 Populus trichocarpa POPTR_0004s23770 I 0.714
Pm000994 Prunus mume Pm000994 I 0.827
Pm031349 Prunus mume Pm031349 I 0.857
PRUPE_ppa001557mg Prunus persica PRUPE_ppa001557mg I 0.827
PRUPE_ppa002065m1g Prunus persica PRUPE_ppa002065m1g I 0.857
30111.m000734 Ricinus communis 30111.m000734 I 0.847
29900.m001540 Ricinus communis 29900.m001540 I 0.867
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.714
SapurV1A.0240s0100 Salix purpurea SapurV1A.0240s0100 I 0.847
SapurV1A.4298s0010 Salix purpurea SapurV1A.4298s0010 I 0.709
SapurV1A.0032s0660 Salix purpurea SapurV1A.0032s0660 I 0.867
SapurV1A.0012s0780 Salix purpurea SapurV1A.0012s0780 I 0.867
SELMODRAFT_430287 Selaginella moellendorffii SELMODRAFT_430287 I 0.724
SELMODRAFT_166729 Selaginella moellendorffii SELMODRAFT_166729 I 0.714
SELMODRAFT_438973 Selaginella moellendorffii SELMODRAFT_438973 I 0.771
SELMODRAFT_437944 Selaginella moellendorffii SELMODRAFT_437944 I 0.771
Si021595m.g Setaria italica Si021595m.g I 0.878
Si021589m.g Setaria italica Si021589m.g I 0.816
Si004598m.g Setaria italica Si004598m.g I 0.816
Si000545m.g Setaria italica Si000545m.g I 0.816
Solyc11g069190.1 Solanum lycopersicum Solyc11g069190.1 I 0.837
Solyc02g077560.2 Solanum lycopersicum Solyc02g077560.2 I 0.848
PGSC0003DMG400031769 Solanum tuberosum PGSC0003DMG400031769 I 0.848
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I 0.714
PGSC0003DMG400008065 Solanum tuberosum PGSC0003DMG400008065 I 0.847
Sb09g028450 Sorghum bicolor Sb09g028450 I 0.878
Sb09g025500 Sorghum bicolor Sb09g025500 I 0.816
Sb03g030740 Sorghum bicolor Sb03g030740 I 0.878
Sb03g034850 Sorghum bicolor Sb03g034850 I 0.837
TCM_029792 Theobroma cacao TCM_029792 I 0.847
TCM_027113 Theobroma cacao TCM_027113 I 0.714
TCM_008374 Theobroma cacao TCM_008374 I 0.704
TCM_041071 Theobroma cacao TCM_041071 I 0.837
Traes_1DL_92BCA55C0 Triticum aestivum Traes_1DL_92BCA55C0 I 0.929
Traes_3AL_561A00448 Triticum aestivum Traes_3AL_561A00448 I 0.804
Traes_3DL_734F1498E Triticum aestivum Traes_3DL_734F1498E I 0.878
Traes_3AL_A30A3C355 Triticum aestivum Traes_3AL_A30A3C355 I 0.888
Traes_1AL_B14FE48AF Triticum aestivum Traes_1AL_B14FE48AF I 0.929
TRAES3BF097400050CFD_g Triticum aestivum TRAES3BF097400050CFD_g I 0.786
Traes_3DL_5C378695E Triticum aestivum Traes_3DL_5C378695E I 0.750
TRIUR3_35254 Triticum urartu TRIUR3_35254 I 0.888
TRIUR3_33948 Triticum urartu TRIUR3_33948 I 0.888
TRIUR3_14814 Triticum urartu TRIUR3_14814 I 0.929
TRIUR3_24520 Triticum urartu TRIUR3_24520 I 0.804
ARF1 Vitis vinifera VIT_12s0035g01800 I 0.714
ETT Vitis vinifera VIT_10s0003g00420 I 0.857
ARF4 Vitis vinifera VIT_06s0004g03130 I 0.837
VIT_01s0244g00150 Vitis vinifera VIT_01s0244g00150 I 0.704
GRMZM2G030710 Zea mays GRMZM2G030710 I 0.867
GRMZM2G437460 Zea mays GRMZM2G437460 I 0.878
GRMZM2G441325 Zea mays GRMZM2G441325 I 0.816
GRMZM5G874163 Zea mays GRMZM5G874163 I 0.844
GRMZM2G056120 Zea mays GRMZM2G056120 I 0.844