PGSC0003DMG400028159 (Solanum tuberosum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 PGSC0003DMG400028159 T020747_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400072354 B3 30 136
PGSC0003DMT400072355 B3 30 136

Links

Other B3 family TFs
Other Solanum tuberosum TFs

207 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 1.000
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.851
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.851
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.842
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.842
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.842
Cla017937 Citrullus lanatus Cla017937 I 0.842
30032.m000462 Ricinus communis 30032.m000462 N 0.842
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.832
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.832
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.832
PK04952.1 Cannabis sativa PK04952.1 I 0.828
TCM_022729 Theobroma cacao TCM_022729 N 0.828
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.822
mgf019085m Mimulus guttatus mgf019085m N 0.822
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.822
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.822
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.822
Bo01079s020 Brassica oleracea Bo01079s020 N 0.822
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.822
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.818
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.818
Ca_25633 Cicer arietinum Ca_25633 I 0.818
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.818
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.812
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.812
Bra017262 Brassica rapa Bra017262 N 0.812
ARF31 Arabidopsis thaliana AT2G36080 N 0.812
Bo4g035110 Brassica oleracea Bo4g035110 N 0.812
Bra005301 Brassica rapa Bra005301 N 0.812
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.812
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.812
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.808
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.802
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.802
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.802
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.802
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N 0.802
OB12G13420 Oryza brachyantha OB12G13420 N 0.802
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.802
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.802
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.800
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.797
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.792
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.792
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.792
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.792
Bo5g136360 Brassica oleracea Bo5g136360 N 0.792
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.792
Bo9g176470 Brassica oleracea Bo9g176470 N 0.792
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.792
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.792
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.792
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.792
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.792
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.792
Bra034828 Brassica rapa Bra034828 N 0.792
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.792
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.792
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.792
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.792
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.786
GSMUA_Achr9G02600_001 Musa acuminata GSMUA_Achr9G02600_001 I 0.785
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.782
MDP0000229742 Malus domestica MDP0000229742 N 0.782
Bra001411 Brassica rapa Bra001411 N 0.782
Bo3g064320 Brassica oleracea Bo3g064320 N 0.782
mgf018965m Mimulus guttatus mgf018965m N 0.778
GSMUA_Achr3G19210_001 Musa acuminata GSMUA_Achr3G19210_001 N 0.772
Ca_00826 Cicer arietinum Ca_00826 N 0.772
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.772
Si027632m.g Setaria italica Si027632m.g N 0.772
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.772
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.772
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.772
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.768
OB04G29740 Oryza brachyantha OB04G29740 I 0.764
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.764
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N 0.762
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.762
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.762
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.762
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.762
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.762
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.762
Bra005886 Brassica rapa Bra005886 N 0.762
F775_02500 Aegilops tauschii F775_02500 N 0.762
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.762
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.762
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.762
Bra009171 Brassica rapa Bra009171 N 0.759
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.758
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.758
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.758
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.757
Bra041023 Brassica rapa Bra041023 N 0.752
Lus10004226.g Linum usitatissimum Lus10004226.g N 0.752
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.752
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.752
Bo3g003800 Brassica oleracea Bo3g003800 N 0.752
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.752
OS11G0156000 Oryza sativa OS11G0156000 N 0.752
OBART11G03590 Oryza barthii OBART11G03590 N 0.752
OMERI11G03310 Oryza meridionalis OMERI11G03310 N 0.752
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.752
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.752
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.752
BGIOSGA036599 Oryza indica BGIOSGA036599 N 0.743
ONIVA12G03130 Oryza nivara ONIVA12G03130 N 0.743
OGLUM12G04180 Oryza glumaepatula OGLUM12G04180 N 0.743
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.743
ORUFI12G03970 Oryza rufipogon ORUFI12G03970 N 0.743
OBART12G03490 Oryza barthii OBART12G03490 N 0.743
OB11G12920 Oryza brachyantha OB11G12920 N 0.743
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.743
LPERR12G03290 Leersia perrieri LPERR12G03290 N 0.743
ORGLA12G0033700 Oryza glaberrima ORGLA12G0033700 N 0.743
GLYMA19G38340 Glycine max GLYMA19G38340 N 0.743
F775_31255 Aegilops tauschii F775_31255 N 0.742
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.737
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I 0.736
TCM_005014 Theobroma cacao TCM_005014 I 0.733
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.733
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.733
MLOC_48938 Hordeum vulgare MLOC_48938 N 0.727
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.727
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.727
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.727
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.724
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.723
30076.m004471 Ricinus communis 30076.m004471 I 0.723
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.723
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.723
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.723
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.723
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.723
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.723
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.723
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.723
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.723
OBART04G22880 Oryza barthii OBART04G22880 I 0.723
OBART03G01650 Oryza barthii OBART03G01650 N 0.723
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.723
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.723
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.723
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.723
Pm024248 Prunus mume Pm024248 I 0.723
OB03G11610 Oryza brachyantha OB03G11610 N 0.723
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.723
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.723
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.723
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.723
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.723
PK11025.1 Cannabis sativa PK11025.1 I 0.723
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.723
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.723
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.723
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.723
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.723
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.723
Si011823m.g Setaria italica Si011823m.g N 0.723
OS03G0120900 Oryza sativa OS03G0120900 N 0.723
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.723
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.723
OS04G0581400 Oryza sativa OS04G0581400 I 0.723
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.723
Cla014858 Citrullus lanatus Cla014858 N 0.717
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.716
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.713
TCM_015590 Theobroma cacao TCM_015590 I 0.713
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.713
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.713
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.713
Si036864m.g Setaria italica Si036864m.g N 0.713
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.713
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.713
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.713
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.713
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.713
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.713
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.713
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.713
mgf023769m Mimulus guttatus mgf023769m N 0.713
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.711
Bra040478 Brassica rapa Bra040478 I 0.710
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.710
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.710
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.704
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.703
Si010849m.g Setaria italica Si010849m.g N 0.703
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.703
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.703
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.703
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.703
Bo3g039420 Brassica oleracea Bo3g039420 N 0.703
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.703
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.703
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.703
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.703
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.703
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.703
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.703
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.703
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.703
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.703
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.700