POPTR_0006s14070 (Populus trichocarpa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 POPTR_0006s14070 T020865_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF8
M01697_2.00
Arabidopsis thaliana
NHTGTCGGN

NCCGACADN
PBM
Weirauch et al.(2014)
pTH8661
0.827 0.827
ARF5
M06701_2.00
Arabidopsis thaliana
WYTTGTCGGN

NCCGACAARW
Dap-seq
OMalley et al.(2016)
MP_col
0.827 0.827
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s14070.1 B3 126 228
POPTR_0006s14070.2 B3 126 228
POPTR_0006s14070.3 B3 123 225
POPTR_0006s14070.4 B3 126 228
POPTR_0006s14070.5 B3 126 228

Links

Other B3 family TFs
Other Populus trichocarpa TFs

Invalid Input OrderBy

574 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action