CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0007s11170
(
Populus trichocarpa
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
POPTR_0007s11170
T020870_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0007s11170.1
B3
109
200
FVKSLVRSHVASCFWMGLPGQFCRAHLPHVDATVTLQDECGKEFKMKYIAYKTGLSAGWRQFCVAHRLFEGDVLVFQLIESCTFKVYVIRAN
POPTR_0007s11170.2
B3
107
198
FVKSLVRSHVASCFWMGLPGQFCRAHLPHVDATVTLQDECGKEFKMKYIAYKTGLSAGWRQFCVAHRLFEGDVLVFQLIESCTFKVYVIRAN
Links
Other
B3
family TFs
Other
Populus trichocarpa
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0711s0090
Salix purpurea
SapurV1A.0711s0090
N
0.957
POPTR_0005s18090
Populus trichocarpa
POPTR_0005s18090
N
0.870
SapurV1A.0815s0020
Salix purpurea
SapurV1A.0815s0020
N
0.859
cassava2445.valid.m1
Manihot esculenta
cassava2445.valid.m1
N
0.826
30115.m001183
Ricinus communis
30115.m001183
N
0.783
Lus10035416.g
Linum usitatissimum
Lus10035416.g
N
0.772
PK03938.1
Cannabis sativa
PK03938.1
N
0.772
Eucgr.H02009
Eucalyptus grandis
Eucgr.H02009
N
0.707
Eucgr.H01651
Eucalyptus grandis
Eucgr.H01651
N
0.707
GLYMA17G20175
Glycine max
GLYMA17G20175
N
0.707
evm.TU.supercontig_55.163
Carica papaya
evm.TU.supercontig_55.163
N
0.707
Gorai.007G212100
Gossypium raimondii
Gorai.007G212100
N
0.707