CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Sb05g019540
(
Sorghum bicolor
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Sb05g019540
T021109_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb05g019540.1
B3
152
254
FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPGRLFLQSGWSVFVSAKRLVAGDAFIFLRGDNGELRVGVRRAM
Sb05g019540.1
B3
752
802
TELIAELDEMFDFNGELKGSNKEWMVVYTDNEGDMMLVGDDPWNEFCNMVH
Sb05g019540.2
B3
151
253
FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPGRLFLQSGWSVFVSAKRLVAGDAFIFLRGDNGELRVGVRRAM
Sb05g019540.2
B3
751
801
TELIAELDEMFDFNGELKGSNKEWMVVYTDNEGDMMLVGDDPWNEFCNMVH
Links
Other
B3
family TFs
Other
Sorghum bicolor
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si025988m.g
Setaria italica
Si025988m.g
N
0.944
OMERI12G08550
Oryza meridionalis
OMERI12G08550
N
0.917
ONIVA12G12070
Oryza nivara
ONIVA12G12070
N
0.917
OLONG_019549
Oryza longistaminata
OLONG_019549
N
0.917
ARF24
Oryza sativa
OS12G0479400
N
0.917
OGLUM12G13560
Oryza glumaepatula
OGLUM12G13560
N
0.917
OPUNC12G10620
Oryza punctata
OPUNC12G10620
N
0.917
ORGLA12G0109100
Oryza glaberrima
ORGLA12G0109100
N
0.917
OBART12G11990
Oryza barthii
OBART12G11990
N
0.917
BGIOSGA036199
Oryza indica
BGIOSGA036199
N
0.917
ORUFI12G13110
Oryza rufipogon
ORUFI12G13110
N
0.910
BRADI4G17410
Brachypodium distachyon
BRADI4G17410
I
0.873
MLOC_18401
Hordeum vulgare
MLOC_18401
N
0.854
LPERR01G37140
Leersia perrieri
LPERR01G37140
N
0.840
OLONG_010675
Oryza longistaminata
OLONG_010675
N
0.833
OB01G51580
Oryza brachyantha
OB01G51580
N
0.833
TRIUR3_02890
Triticum urartu
TRIUR3_02890
N
0.833
TRAES3BF111600210CFD_g
Triticum aestivum
TRAES3BF111600210CFD_g
N
0.833
GSMUA_Achr6G16450_001
Musa acuminata
GSMUA_Achr6G16450_001
N
0.819
Aquca_100_00036
Aquilegia coerulea
Aquca_100_00036
N
0.792
PGSC0003DMG400020711
Solanum tuberosum
PGSC0003DMG400020711
I
0.736
Solyc01g103050.2
Solanum lycopersicum
Solyc01g103050.2
N
0.729
PRUPE_ppa002394mg
Prunus persica
PRUPE_ppa002394mg
N
0.729
AMTR_s00021p00221770
Amborella trichopoda
AMTR_s00021p00221770
N
0.729
ARF1
Arabidopsis thaliana
AT1G59750
N
0.722
POPTR_0003s00890
Populus trichocarpa
POPTR_0003s00890
N
0.722
Eucgr.G00076
Eucalyptus grandis
Eucgr.G00076
I
0.719
SapurV1A.0225s0120
Salix purpurea
SapurV1A.0225s0120
N
0.715
29609.m000587
Ricinus communis
29609.m000587
N
0.715
Cla001927
Citrullus lanatus
Cla001927
N
0.713
Lus10007440.g
Linum usitatissimum
Lus10007440.g
N
0.708