scaffold_802655.1 (Arabidopsis lyrata)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 scaffold_802655.1 T021201_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G60130
M06712_2.00 		Arabidopsis thaliana
WTTTBCTTNDNWTTTBCTT
AAGVAAAWNHNAAGVAAAW		 Dap-seq
OMalley et al.(2016)
AT5G60130_col_a 		0.770 0.770
AT5G60130
M06713_2.00 		Arabidopsis thaliana
DTTTTSCTTAWNTTTTGCTTA
TAAGCAAAANWTAAGSAAAAH		 Dap-seq
OMalley et al.(2016)
AT5G60130_colamp_a 		0.770 0.770
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_802655.1 B3 14 108
scaffold_802655.1 B3 144 239

Links

Other B3 family TFs
Other Arabidopsis lyrata TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT5G60130 Arabidopsis thaliana AT5G60130 D 0.840
Bostr.7867s0314 Boechera stricta Bostr.7867s0314 I 0.801
Bostr.25219s0556 Boechera stricta Bostr.25219s0556 I 0.756