SELMODRAFT_444549 (Selaginella moellendorffii)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 SELMODRAFT_444549 T021234_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF16
M06708_2.00
Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA

TTTTYCCGCCAAAAMCGTAAA
Dap-seq
OMalley et al.(2016)
ARF16_col_b
0.833 0.833
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ18315 B3 137 239

Links

Other B3 family TFs
Other Selaginella moellendorffii TFs

211 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GATA8 Arabidopsis thaliana AT3G54810 D 0.000
Cucsa.308400 Cucumis sativus Cucsa.308400 I 0.000
Bostr.0697s0095 Boechera stricta Bostr.0697s0095 I 0.000
Cagra.1742s0041 Capsella grandiflora Cagra.1742s0041 I 0.000
Carubv10017647m.g Capsella rubella Carubv10017647m.g I 0.000
Ciclev10032018m.g Citrus clementina Ciclev10032018m.g I 0.000
Eucgr.G02840 Eucalyptus grandis Eucgr.G02840 I 0.000
evm.TU.supercontig_546.1 Carica papaya evm.TU.supercontig_546.1 I 0.000
Gorai.009G313700 Gossypium raimondii Gorai.009G313700 I 0.000
Gorai.011G238800 Gossypium raimondii Gorai.011G238800 I 0.000
MDP0000243535 Malus domestica MDP0000243535 I 0.000
orange1.1g016706m.g Citrus sinensis orange1.1g016706m.g I 0.000
SapurV1A.0518s0130 Salix purpurea SapurV1A.0518s0130 I 0.000
SapurV1A.0657s0040 Salix purpurea SapurV1A.0657s0040 I 0.000
cassava37880.valid.m1 Manihot esculenta cassava37880.valid.m1 I 0.000
27494.m000044 Ricinus communis 27494.m000044 I 0.000
Bo4g118340 Brassica oleracea Bo4g118340 I 0.000
Bo8g085930 Brassica oleracea Bo8g085930 I 0.000
Bra007099 Brassica rapa Bra007099 I 0.000
BME3-ZF Arabidopsis lyrata fgenesh2_kg.5__1883__AT3G54810.2 I 0.000
GLYMA10G35470 Glycine max GLYMA10G35470 I 0.000
GLYMA20G32050 Glycine max GLYMA20G32050 I 0.000
LPERR05G19030 Leersia perrieri LPERR05G19030 I 0.000
MTR_1g094930 Medicago truncatula MTR_1g094930 I 0.000
POPTR_0008s03880 Populus trichocarpa POPTR_0008s03880 I 0.000
POPTR_0010s23010 Populus trichocarpa POPTR_0010s23010 I 0.000
TCM_043158 Theobroma cacao TCM_043158 I 0.000
BME3-ZF Vitis vinifera VIT_13s0019g04390 I 0.000
Ca_08487 Cicer arietinum Ca_08487 I 0.000
Thhalv10010544m.g Eutrema salsugineum Thhalv10010544m.g I 0.000