SELMODRAFT_451564 (Selaginella moellendorffii)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 SELMODRAFT_451564 T021239_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF16
M06708_2.00
Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA

TTTTYCCGCCAAAAMCGTAAA
Dap-seq
OMalley et al.(2016)
ARF16_col_b
0.794 0.794
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ29537 B3 125 227

Links

Other B3 family TFs
Other Selaginella moellendorffii TFs

201 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27494.m000045 Ricinus communis 27494.m000045 I 0.794
27538.m000327 Ricinus communis 27538.m000327 I 0.845
30078.m002329 Ricinus communis 30078.m002329 I 0.804
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.814
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.866
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.887
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.835
ARF10 Arabidopsis thaliana AT2G28350 I 0.825
ARF16 Arabidopsis thaliana AT4G30080 D 0.794
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.804
ARF10 Oryza indica BGIOSGA016767 I 0.722
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.835
Bo1g014600 Brassica oleracea Bo1g014600 I 0.794
Bo4g071620 Brassica oleracea Bo4g071620 I 0.825
Bo7g114200 Brassica oleracea Bo7g114200 I 0.804
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.825
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.794
Bra011162 Brassica rapa Bra011162 I 0.804
Bra011955 Brassica rapa Bra011955 I 0.814
Bra024109 Brassica rapa Bra024109 I 0.794
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.804
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.845
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.802
BRADI5G15904 Brachypodium distachyon BRADI5G15904 I 0.763
BRADI5G27400 Brachypodium distachyon BRADI5G27400 N 0.701
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.794
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.825
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.794
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.825
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.814
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.804
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.814
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.814
Ca_02541 Cicer arietinum Ca_02541 I 0.835
Ca_17136 Cicer arietinum Ca_17136 I 0.794
Ca_26121 Cicer arietinum Ca_26121 I 0.814
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.804
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.814
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.814
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.814
Cla008883 Citrullus lanatus Cla008883 I 0.804
Cla013979 Citrullus lanatus Cla013979 I 0.814
Cla018574 Citrullus lanatus Cla018574 I 0.814
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.814
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.825
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.804
estExt_fgenesh1_pm.C_3390006 Physcomitrella patens estExt_fgenesh1_pm.C_3390006 I 0.918
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I 0.711
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.794
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.825
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.804
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.794
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.814
e_gw1.279.55.1 Physcomitrella patens e_gw1.279.55.1 I 0.887
F775_32978 Aegilops tauschii F775_32978 I 0.835
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.825
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.814
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.835
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.804
GLYMA04G43350 Glycine max GLYMA04G43350 N 0.711
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.804
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.773
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.794
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.794
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.814
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.804
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.804
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.773
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.763
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.814
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.804
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.814
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.784
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.784
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.753
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.825
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.845
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.825
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.773
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.835
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.845
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.804
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.804
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.742
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.794
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.845
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.814
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.804
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.825
Lus10023519.g Linum usitatissimum Lus10023519.g I 0.773
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.804
Lus10040403.g Linum usitatissimum Lus10040403.g I 0.773
MDP0000131481 Malus domestica MDP0000131481 I 0.825
MDP0000221322 Malus domestica MDP0000221322 I 0.825
MDP0000750392 Malus domestica MDP0000750392 I 0.794
mgf000336m Mimulus guttatus mgf000336m I 0.773
mgf005300m Mimulus guttatus mgf005300m I 0.814
mgf016139m Mimulus guttatus mgf016139m I 0.814
mgf024607m Mimulus guttatus mgf024607m I 0.784
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.845
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.794
MTR_0041s0110 Medicago truncatula MTR_0041s0110 I 0.732
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.804
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.773
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.825
MTR_3g073420 Medicago truncatula MTR_3g073420 N 0.701
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.814
MTR_7g101280 Medicago truncatula MTR_7g101280 I 0.732
OB02G32150 Oryza brachyantha OB02G32150 I 0.814
OB06G32920 Oryza brachyantha OB06G32920 I 0.814
OB10G20590 Oryza brachyantha OB10G20590 I 0.845
OBART04G18910 Oryza barthii OBART04G18910 I 0.722
OBART06G25230 Oryza barthii OBART06G25230 I 0.814
OBART10G13410 Oryza barthii OBART10G13410 I 0.835
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.722
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.804
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.814
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.835
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.794
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.773
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.804
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.722
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.814
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.835
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.804
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.814
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.722
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.835
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.804
OPUNC04G16630 Oryza punctata OPUNC04G16630 I 0.711
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.814
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.835
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.814
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.814
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.814
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.804
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.722
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.814
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.835
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.804
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.814
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.835
ARF8 Oryza sativa OS02G0628600 I 0.804
OS04G0519700 Oryza sativa OS04G0519700 I 0.722
ARF18 Oryza sativa OS06G0685700 I 0.814
ARF22 Oryza sativa OS10G0479900 I 0.835
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.804
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.740
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.804
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.740
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.814
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.833
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.814
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.794
PK10136.1 Cannabis sativa PK10136.1 I 0.732
PK13064.1 Cannabis sativa PK13064.1 I 0.794
PK13393.1 Cannabis sativa PK13393.1 I 0.814
PK17007.1 Cannabis sativa PK17007.1 I 0.814
Pm018533 Prunus mume Pm018533 I 0.804
Pm030120 Prunus mume Pm030120 I 0.814
Pm031275 Prunus mume Pm031275 I 0.835
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.814
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.773
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.814
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.814
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.794
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.814
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.825
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.814
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.825
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.814
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.784
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.825
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.825
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.825
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.794
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.845
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.825
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.814
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.794
SELMODRAFT_437622 Selaginella moellendorffii SELMODRAFT_437622 I 1.000
SELMODRAFT_443304 Selaginella moellendorffii SELMODRAFT_443304 I 0.897
SELMODRAFT_444549 Selaginella moellendorffii SELMODRAFT_444549 I 0.897
Si005991m.g Setaria italica Si005991m.g I 0.814
Si009541m.g Setaria italica Si009541m.g I 0.701
Si016509m.g Setaria italica Si016509m.g I 0.814
Si034525m.g Setaria italica Si034525m.g I 0.845
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I 0.784
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.814
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.825
TCM_022163 Theobroma cacao TCM_022163 I 0.804
TCM_042067 Theobroma cacao TCM_042067 I 0.835
TCM_043157 Theobroma cacao TCM_043157 I 0.814
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.825
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.794
Traes_2AL_C70217249 Triticum aestivum Traes_2AL_C70217249 N 0.701
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.742
Traes_6DL_52A25BEA4 Triticum aestivum Traes_6DL_52A25BEA4 I 0.722
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.835
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.794
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.784