Si016509m.g (Setaria italica)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Si016509m.g T021298_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF16
M06708_2.00
Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA

TTTTYCCGCCAAAAMCGTAAA
Dap-seq
OMalley et al.(2016)
ARF16_col_b
0.875 0.875
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si016509m B3 122 224
Si016559m B3 122 224

Links

Other B3 family TFs
Other Setaria italica TFs

217 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.990
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.990
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.979
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.979
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.979
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.979
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.979
ARF8 Oryza sativa OS02G0628600 I 0.979
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.979
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.979
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.979
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.969
OB02G32150 Oryza brachyantha OB02G32150 I 0.969
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.958
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.948
Traes_6DL_52A25BEA4 Triticum aestivum Traes_6DL_52A25BEA4 I 0.931
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.927
27538.m000327 Ricinus communis 27538.m000327 I 0.927
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.917
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.917
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.917
Pm031275 Prunus mume Pm031275 I 0.917
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.917
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.908
MDP0000131481 Malus domestica MDP0000131481 I 0.907
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.907
MDP0000221322 Malus domestica MDP0000221322 I 0.907
TCM_042067 Theobroma cacao TCM_042067 I 0.907
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.907
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.906
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.906
OB10G20590 Oryza brachyantha OB10G20590 I 0.906
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.906
mgf016139m Mimulus guttatus mgf016139m I 0.906
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.906
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.906
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.897
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.897
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.897
ARF22 Oryza sativa OS10G0479900 I 0.897
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.897
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.897
ARF18 Oryza sativa OS06G0685700 I 0.897
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.897
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.897
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.897
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.897
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.897
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.897
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.897
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.897
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.897
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.897
OBART06G25230 Oryza barthii OBART06G25230 I 0.897
OBART10G13410 Oryza barthii OBART10G13410 I 0.897
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.897
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.897
Si034525m.g Setaria italica Si034525m.g I 0.897
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.897
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.897
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.897
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.897
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.897
Si005991m.g Setaria italica Si005991m.g I 0.897
OB06G32920 Oryza brachyantha OB06G32920 I 0.897
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.897
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.896
Ca_02541 Cicer arietinum Ca_02541 I 0.896
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.896
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.896
Cla018574 Citrullus lanatus Cla018574 I 0.896
Pm030120 Prunus mume Pm030120 I 0.896
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.896
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.896
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.896
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.896
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.896
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.896
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.896
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.896
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.896
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.896
F775_32978 Aegilops tauschii F775_32978 I 0.896
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.896
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.896
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.896
Bra011955 Brassica rapa Bra011955 I 0.896
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.896
ARF10 Arabidopsis thaliana AT2G28350 I 0.896
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.887
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.887
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.887
PK17007.1 Cannabis sativa PK17007.1 I 0.887
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.887
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.887
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.887
TCM_043157 Theobroma cacao TCM_043157 I 0.885
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.885
Bo4g071620 Brassica oleracea Bo4g071620 I 0.885
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.885
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.885
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.885
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.885
Ca_26121 Cicer arietinum Ca_26121 I 0.885
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.885
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.885
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.885
TCM_022163 Theobroma cacao TCM_022163 I 0.876
Cla008883 Citrullus lanatus Cla008883 I 0.876
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.876
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.876
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.876
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.876
30078.m002329 Ricinus communis 30078.m002329 I 0.876
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.876
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.876
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.876
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.876
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.876
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.876
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.876
PK13064.1 Cannabis sativa PK13064.1 I 0.876
Bo7g114200 Brassica oleracea Bo7g114200 I 0.875
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.875
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.875
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.875
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.875
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.875
Ca_17136 Cicer arietinum Ca_17136 I 0.875
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.875
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.875
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.875
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.875
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.875
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.875
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.875
ARF16 Arabidopsis thaliana AT4G30080 D 0.875
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.875
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.875
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.874
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.866
Bra011162 Brassica rapa Bra011162 I 0.866
mgf005300m Mimulus guttatus mgf005300m I 0.866
estExt_fgenesh1_pm.C_3390006 Physcomitrella patens estExt_fgenesh1_pm.C_3390006 I 0.865
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.865
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.865
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.865
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.865
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.865
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.865
Bo1g014600 Brassica oleracea Bo1g014600 I 0.856
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.856
Bra024109 Brassica rapa Bra024109 I 0.856
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.856
Pm018533 Prunus mume Pm018533 I 0.856
MDP0000750392 Malus domestica MDP0000750392 I 0.856
SELMODRAFT_444549 Selaginella moellendorffii SELMODRAFT_444549 I 0.854
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.854
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.854
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.854
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.854
mgf000336m Mimulus guttatus mgf000336m I 0.854
SELMODRAFT_443304 Selaginella moellendorffii SELMODRAFT_443304 I 0.854
27494.m000045 Ricinus communis 27494.m000045 I 0.854
mgf024607m Mimulus guttatus mgf024607m I 0.845
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.845
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.845
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.844
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.844
OBART02G24860 Oryza barthii OBART02G24860 I 0.840
Cla013979 Citrullus lanatus Cla013979 I 0.835
e_gw1.279.55.1 Physcomitrella patens e_gw1.279.55.1 I 0.835
Lus10023519.g Linum usitatissimum Lus10023519.g I 0.833
Lus10040403.g Linum usitatissimum Lus10040403.g I 0.833
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.833
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.825
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.823
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.823
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.823
SELMODRAFT_451564 Selaginella moellendorffii SELMODRAFT_451564 I 0.814
SELMODRAFT_437622 Selaginella moellendorffii SELMODRAFT_437622 I 0.814
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.814
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.802
OS04G0519700 Oryza sativa OS04G0519700 I 0.802
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.802
OBART04G18910 Oryza barthii OBART04G18910 I 0.802
ARF10 Oryza indica BGIOSGA016767 I 0.802
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.802
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.802
OPUNC04G16630 Oryza punctata OPUNC04G16630 I 0.794
PK13393.1 Cannabis sativa PK13393.1 I 0.792
LjSGA_045968.2 Lotus japonicus LjSGA_045968.2 I 0.783
Si009541m.g Setaria italica Si009541m.g I 0.773
ORUFI04G20430 Oryza rufipogon ORUFI04G20430 I 0.761
OB04G25990 Oryza brachyantha OB04G25990 I 0.760
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.760
Ca_08488 Cicer arietinum Ca_08488 I 0.760
Solyc10g086130.1 Solanum lycopersicum Solyc10g086130.1 I 0.760
MTR_0041s0110 Medicago truncatula MTR_0041s0110 I 0.750
MTR_7g101280 Medicago truncatula MTR_7g101280 I 0.750
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I 0.745
Pavir.J37640 Panicum virgatum Pavir.J37640 I 0.740
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I 0.732
BRADI5G15904 Brachypodium distachyon BRADI5G15904 I 0.730
PK10136.1 Cannabis sativa PK10136.1 I 0.729
Pavir.J03524 Panicum virgatum Pavir.J03524 I 0.719
MTR_7g101275 Medicago truncatula MTR_7g101275 I 0.719
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.719
Cla022413 Citrullus lanatus Cla022413 I 0.719
TCM_029792 Theobroma cacao TCM_029792 I 0.717
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I 0.714
gene02234-v1.0-hybrid Fragaria vesca gene02234-v1.0-hybrid I 0.708
GSMUA_Achr9G29480_001 Musa acuminata GSMUA_Achr9G29480_001 I 0.708
Ca_17624 Cicer arietinum Ca_17624 I 0.701
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I 0.701
TCM_035002 Theobroma cacao TCM_035002 I 0.701