TCM_004526 (Theobroma cacao)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 TCM_004526 T021455_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF2
M06714_2.00 		Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN		 Dap-seq
OMalley et al.(2016)
ARF2_col_v31 		0.735 0.735
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOX94930 B3 187 290
EOX94931 B3 187 290
EOX94932 B3 187 290

Links

Other B3 family TFs
Other Theobroma cacao TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.007G131900 Gossypium raimondii Gorai.007G131900 I 0.837
VIT_07s0104g01230 Vitis vinifera VIT_07s0104g01230 I 0.827
orange1.1g005491m.g Citrus sinensis orange1.1g005491m.g I 0.797
MDP0000123466 Malus domestica MDP0000123466 I 0.786
Ciclev10019257m.g Citrus clementina Ciclev10019257m.g I 0.773
orange1.1g005060m.g Citrus sinensis orange1.1g005060m.g I 0.773
PRUPE_ppa022314mg Prunus persica PRUPE_ppa022314mg I 0.765
GLYMA01G25270 Glycine max GLYMA01G25270 I 0.765
GSMUA_Achr6G08090_001 Musa acuminata GSMUA_Achr6G08090_001 I 0.765
OB12G20020 Oryza brachyantha OB12G20020 I 0.765
GLYMA03G17450 Glycine max GLYMA03G17450 I 0.765
PK04762.1 Cannabis sativa PK04762.1 I 0.765
cassava42790.valid.m1 Manihot esculenta cassava42790.valid.m1 I 0.761
Cucsa.156920 Cucumis sativus Cucsa.156920 I 0.761
Ciclev10019131m.g Citrus clementina Ciclev10019131m.g I 0.760
VIT_01s0244g00150 Vitis vinifera VIT_01s0244g00150 I 0.755
POPTR_0012s10790 Populus trichocarpa POPTR_0012s10790 I 0.755
POPTR_0004s23770 Populus trichocarpa POPTR_0004s23770 I 0.755
GRMZM2G116557 Zea mays GRMZM2G116557 I 0.755
GRMZM2G006042 Zea mays GRMZM2G006042 I 0.755
GRMZM2G352159 Zea mays GRMZM2G352159 I 0.755
ARF1 Vitis vinifera VIT_12s0035g01800 I 0.755
AMTR_s00057p00141830 Amborella trichopoda AMTR_s00057p00141830 I 0.755
Sb08g014320 Sorghum bicolor Sb08g014320 I 0.755
Pavir.Cb00753 Panicum virgatum Pavir.Cb00753 I 0.755
Pavir.J11622 Panicum virgatum Pavir.J11622 I 0.755
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.755
PK12669.1 Cannabis sativa PK12669.1 I 0.755
chr4.CM0175.280.nc Lotus japonicus chr4.CM0175.280.nc I 0.755
Si021216m.g Setaria italica Si021216m.g I 0.755
LPERR12G09930 Leersia perrieri LPERR12G09930 I 0.755
Pm019941 Prunus mume Pm019941 I 0.755
TCM_005126 Theobroma cacao TCM_005126 I 0.755
POPTR_0014s12980 Populus trichocarpa POPTR_0014s12980 I 0.755
MTR_2g005240 Medicago truncatula MTR_2g005240 I 0.753
TCM_027113 Theobroma cacao TCM_027113 I 0.753
GLYMA16G00220 Glycine max GLYMA16G00220 I 0.753
LjSGA_022281.1 Lotus japonicus LjSGA_022281.1 I 0.753
MDP0000929655 Malus domestica MDP0000929655 I 0.753
Traes_3DL_1FC3735D9 Triticum aestivum Traes_3DL_1FC3735D9 I 0.746
Ciclev10030696m.g Citrus clementina Ciclev10030696m.g I 0.746
Eucgr.K02197 Eucalyptus grandis Eucgr.K02197 I 0.746
Si000340m.g Setaria italica Si000340m.g I 0.745
Pavir.Ea03860 Panicum virgatum Pavir.Ea03860 I 0.745
PDK_20s1585531g001 Phoenix dactylifera PDK_20s1585531g001 I 0.745
Pavir.Eb03734 Panicum virgatum Pavir.Eb03734 I 0.745
Sb03g044630 Sorghum bicolor Sb03g044630 I 0.745
Solyc03g118290.2 Solanum lycopersicum Solyc03g118290.2 I 0.745
POPTR_0015s11660 Populus trichocarpa POPTR_0015s11660 I 0.745
PK16974.1 Cannabis sativa PK16974.1 I 0.745
XM_002320618.1 Populus trichocarpa POPTR_0020s00210 I 0.745
MDP0000258032 Malus domestica MDP0000258032 I 0.745
Eucgr.B03551 Eucalyptus grandis Eucgr.B03551 I 0.745
mgf015308m Mimulus guttatus mgf015308m I 0.745
ARF2 Vitis vinifera VIT_17s0000g00320 I 0.745
Cla019614 Citrullus lanatus Cla019614 I 0.745
gene06434-v1.0-hybrid Fragaria vesca gene06434-v1.0-hybrid I 0.745
Gorai.001G054600 Gossypium raimondii Gorai.001G054600 I 0.745
mgf006511m Mimulus guttatus mgf006511m I 0.745
Gorai.008G210200 Gossypium raimondii Gorai.008G210200 I 0.745
TCM_008374 Theobroma cacao TCM_008374 I 0.745
MDP0000310875 Malus domestica MDP0000310875 I 0.745
VIT_15s0046g00290 Vitis vinifera VIT_15s0046g00290 I 0.745
MTR_4g021580 Medicago truncatula MTR_4g021580 I 0.745
GRMZM2G338259 Zea mays GRMZM2G338259 I 0.745
Bo3g108130 Brassica oleracea Bo3g108130 I 0.745
Bra010048 Brassica rapa Bra010048 I 0.745
GLYMA03G41920 Glycine max GLYMA03G41920 I 0.745
MTR_8g100050 Medicago truncatula MTR_8g100050 I 0.745
GSMUA_Achr10G12070_001 Musa acuminata GSMUA_Achr10G12070_001 I 0.745
PDK_20s1651081g001 Phoenix dactylifera PDK_20s1651081g001 I 0.744
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I 0.742
Aquca_003_00899 Aquilegia coerulea Aquca_003_00899 I 0.735
mgf020855m Mimulus guttatus mgf020855m I 0.735
Bostr.26833s0038 Boechera stricta Bostr.26833s0038 I 0.735
Cagra.4553s0009 Capsella grandiflora Cagra.4553s0009 I 0.735
Ca_05681 Cicer arietinum Ca_05681 I 0.735
Carubv10025860m.g Capsella rubella Carubv10025860m.g I 0.735
OPUNC01G41560 Oryza punctata OPUNC01G41560 I 0.735
Ca_21948 Cicer arietinum Ca_21948 I 0.735
GLYMA05G38540 Glycine max GLYMA05G38540 I 0.735
cassava17840.valid.m1 Manihot esculenta cassava17840.valid.m1 I 0.735
cassava37256.valid.m1 Manihot esculenta cassava37256.valid.m1 I 0.735
Pm024588 Prunus mume Pm024588 I 0.735
cassava43609.valid.m1 Manihot esculenta cassava43609.valid.m1 I 0.735
cassava17839.valid.m1 Manihot esculenta cassava17839.valid.m1 I 0.735
F775_31280 Aegilops tauschii F775_31280 I 0.735
ARF23 Oryza indica BGIOSGA033901 I 0.735
Thhalv10003641m.g Eutrema salsugineum Thhalv10003641m.g I 0.735
SapurV1A.0774s0040 Salix purpurea SapurV1A.0774s0040 I 0.735
ARF2 Arabidopsis thaliana AT5G62000 D 0.735
LjSGA_059323.1 Lotus japonicus LjSGA_059323.1 I 0.735
PDK_20s1394651g001 Phoenix dactylifera PDK_20s1394651g001 I 0.735
LjSGA_068216.1 Lotus japonicus LjSGA_068216.1 I 0.735
SapurV1A.0672s0210 Salix purpurea SapurV1A.0672s0210 I 0.735
SapurV1A.0517s0240 Salix purpurea SapurV1A.0517s0240 I 0.735
Lus10043200.g Linum usitatissimum Lus10043200.g I 0.735
Lus10032541.g Linum usitatissimum Lus10032541.g I 0.735
VIT_02s0025g01740 Vitis vinifera VIT_02s0025g01740 I 0.735
Bra035910 Brassica rapa Bra035910 I 0.735
orange1.1g004792m.g Citrus sinensis orange1.1g004792m.g I 0.735
Bo2g161810 Brassica oleracea Bo2g161810 I 0.735
Bo9g014770 Brassica oleracea Bo9g014770 I 0.735
evm.TU.supercontig_9.161 Carica papaya evm.TU.supercontig_9.161 I 0.735
GLYMA08G01100 Glycine max GLYMA08G01100 I 0.735
Solyc12g042070.1 Solanum lycopersicum Solyc12g042070.1 I 0.735
PGSC0003DMG400014452 Solanum tuberosum PGSC0003DMG400014452 I 0.735
OGLUM11G14710 Oryza glumaepatula OGLUM11G14710 I 0.735
ORUFI11G16290 Oryza rufipogon ORUFI11G16290 I 0.735
OGLUM01G46840 Oryza glumaepatula OGLUM01G46840 I 0.735
OBART11G15270 Oryza barthii OBART11G15270 I 0.735
OS11G0523800 Oryza sativa OS11G0523800 I 0.735
OB11G21910 Oryza brachyantha OB11G21910 I 0.735
PGSC0003DMG400014179 Solanum tuberosum PGSC0003DMG400014179 I 0.735
ARF2 Arabidopsis lyrata scaffold_802850.1 I 0.735
PRUPE_ppa001392mg Prunus persica PRUPE_ppa001392mg I 0.735
ONIVA12G10760 Oryza nivara ONIVA12G10760 I 0.735
LPERR11G11950 Leersia perrieri LPERR11G11950 I 0.735
OPUNC11G12650 Oryza punctata OPUNC11G12650 I 0.735
TCM_014743 Theobroma cacao TCM_014743 I 0.735
OMERI11G12590 Oryza meridionalis OMERI11G12590 I 0.735
OLONG_022378 Oryza longistaminata OLONG_022378 I 0.735
ORGLA11G0129300 Oryza glaberrima ORGLA11G0129300 I 0.735
Traes_3DL_BC7A7E056 Triticum aestivum Traes_3DL_BC7A7E056 I 0.732
SapurV1A.0003s1010 Salix purpurea SapurV1A.0003s1010 I 0.732
SapurV1A.0340s0160 Salix purpurea SapurV1A.0340s0160 I 0.732
AMTR_s00016p00168950 Amborella trichopoda AMTR_s00016p00168950 I 0.732
MTR_7g062540 Medicago truncatula MTR_7g062540 I 0.732
Gorai.007G109500 Gossypium raimondii Gorai.007G109500 I 0.729
PGSC0003DMG400000118 Solanum tuberosum PGSC0003DMG400000118 I 0.727
Eucgr.E00888 Eucalyptus grandis Eucgr.E00888 I 0.724
TCM_016500 Theobroma cacao TCM_016500 I 0.724
TRAES3BF001100080CFD_g Triticum aestivum TRAES3BF001100080CFD_g I 0.724
OMERI01G39560 Oryza meridionalis OMERI01G39560 I 0.724
GLYMA04G37760 Glycine max GLYMA04G37760 I 0.724
MLOC_68907 Hordeum vulgare MLOC_68907 I 0.724
ORUFI01G45980 Oryza rufipogon ORUFI01G45980 I 0.724
OBART01G42570 Oryza barthii OBART01G42570 I 0.724
GLYMA07G16170 Glycine max GLYMA07G16170 I 0.724
GLYMA06G17320 Glycine max GLYMA06G17320 I 0.724
evm.TU.supercontig_96.40 Carica papaya evm.TU.supercontig_96.40 I 0.724
F775_32662 Aegilops tauschii F775_32662 I 0.724
Gorai.008G126200 Gossypium raimondii Gorai.008G126200 I 0.724
BRADI4G07470 Brachypodium distachyon BRADI4G07470 I 0.724
BRADI2G59480 Brachypodium distachyon BRADI2G59480 I 0.724
ONIVA01G48620 Oryza nivara ONIVA01G48620 I 0.724
BRADI4G17410 Brachypodium distachyon BRADI4G17410 I 0.724
GSMUA_AchrUn_randomG14770_001 Musa acuminata GSMUA_AchrUn_randomG14770_001 I 0.724
Bra013748 Brassica rapa Bra013748 I 0.724
GSMUA_Achr6G07390_001 Musa acuminata GSMUA_Achr6G07390_001 I 0.724
ORGLA01G0363100 Oryza glaberrima ORGLA01G0363100 I 0.724
Gorai.007G026900 Gossypium raimondii Gorai.007G026900 I 0.724
SapurV1A.0035s0230 Salix purpurea SapurV1A.0035s0230 I 0.724
POPTR_0001s10900 Populus trichocarpa POPTR_0001s10900 I 0.724
cassava45425.m1 Manihot esculenta cassava45425.m1 I 0.724
cassava45424.m1 Manihot esculenta cassava45424.m1 I 0.724
cassava45426.m1 Manihot esculenta cassava45426.m1 I 0.724
ARF9 Arabidopsis thaliana AT4G23980 I 0.724
Cucsa.114840 Cucumis sativus Cucsa.114840 I 0.724
cassava45423.m1 Manihot esculenta cassava45423.m1 I 0.724
cassava45422.m1 Manihot esculenta cassava45422.m1 I 0.724
cassava42787.valid.m1 Manihot esculenta cassava42787.valid.m1 I 0.724
cassava42788.valid.m1 Manihot esculenta cassava42788.valid.m1 I 0.724
cassava42789.valid.m1 Manihot esculenta cassava42789.valid.m1 I 0.724
Thhalv10024554m.g Eutrema salsugineum Thhalv10024554m.g I 0.724
cassava29828.valid.m1 Manihot esculenta cassava29828.valid.m1 I 0.724
Cucsa.078800 Cucumis sativus Cucsa.078800 I 0.724
30068.m002516 Ricinus communis 30068.m002516 I 0.724
POPTR_0014s09560 Populus trichocarpa POPTR_0014s09560 I 0.724
ARF4 Oryza sativa OS01G0927600 I 0.724
BGIOSGA005099 Oryza indica BGIOSGA005099 I 0.724
Bostr.7867s0204 Boechera stricta Bostr.7867s0204 I 0.724
Gorai.007G044900 Gossypium raimondii Gorai.007G044900 I 0.722
Solyc01g096070.2 Solanum lycopersicum Solyc01g096070.2 I 0.717
Aquca_008_00175 Aquilegia coerulea Aquca_008_00175 I 0.717
Bo1g037360 Brassica oleracea Bo1g037360 I 0.714
PK02218.1 Cannabis sativa PK02218.1 I 0.714
Bo7g109250 Brassica oleracea Bo7g109250 I 0.714
SapurV1A.0013s0230 Salix purpurea SapurV1A.0013s0230 I 0.714
MDP0000194603 Malus domestica MDP0000194603 I 0.714
POPTR_0002s17350 Populus trichocarpa POPTR_0002s17350 I 0.714
POPTR_0003s14200 Populus trichocarpa POPTR_0003s14200 I 0.714
Bra019255 Brassica rapa Bra019255 I 0.714
MDP0000139073 Malus domestica MDP0000139073 I 0.714
PK07332.1 Cannabis sativa PK07332.1 I 0.714
evm.TU.contig_31756 Carica papaya evm.TU.contig_31756 I 0.714
cassava32762.m1 Manihot esculenta cassava32762.m1 I 0.714
GLYMA18G40180 Glycine max GLYMA18G40180 I 0.714
PRUPE_ppa002617mg Prunus persica PRUPE_ppa002617mg I 0.714
Pm024149 Prunus mume Pm024149 I 0.714
Pm018352 Prunus mume Pm018352 I 0.714
TRIUR3_17755 Triticum urartu TRIUR3_17755 I 0.714
ARF9 Arabidopsis lyrata Al_scaffold_0007_1752 I 0.714
Ca_23296 Cicer arietinum Ca_23296 I 0.714
PRUPE_ppa002230mg Prunus persica PRUPE_ppa002230mg I 0.714
Aquca_013_00067 Aquilegia coerulea Aquca_013_00067 I 0.714
Gorai.003G078000 Gossypium raimondii Gorai.003G078000 I 0.714
gene19138-v1.0-hybrid Fragaria vesca gene19138-v1.0-hybrid I 0.714
Gorai.001G153900 Gossypium raimondii Gorai.001G153900 I 0.714
SapurV1A.0499s0060 Salix purpurea SapurV1A.0499s0060 I 0.711
GSMUA_Achr9G08310_001 Musa acuminata GSMUA_Achr9G08310_001 I 0.711
GRMZM2G378580 Zea mays GRMZM2G378580 I 0.711
PDK_20s1869091g001 Phoenix dactylifera PDK_20s1869091g001 I 0.711
POPTR_0003s16210 Populus trichocarpa POPTR_0003s16210 I 0.711
PDK_20s1477241g001 Phoenix dactylifera PDK_20s1477241g001 I 0.708
GLYMA19G39340 Glycine max GLYMA19G39340 N 0.707
Gorai.004G085400 Gossypium raimondii Gorai.004G085400 N 0.707
LjSGA_144865.1 Lotus japonicus LjSGA_144865.1 I 0.707
GSMUA_AchrUn_randomG11300_001 Musa acuminata GSMUA_AchrUn_randomG11300_001 I 0.704
Lus10023058.g Linum usitatissimum Lus10023058.g I 0.704
Cla013021 Citrullus lanatus Cla013021 I 0.704
gene27792-v1.0-hybrid Fragaria vesca gene27792-v1.0-hybrid N 0.704
ARF11 Arabidopsis thaliana AT2G46530 I 0.704
Thhalv10005857m.g Eutrema salsugineum Thhalv10005857m.g I 0.704
Cagra.0483s0062 Capsella grandiflora Cagra.0483s0062 I 0.704
Cagra.0050s0046 Capsella grandiflora Cagra.0050s0046 I 0.704
Carubv10018954m.g Capsella rubella Carubv10018954m.g I 0.704
Carubv10022841m.g Capsella rubella Carubv10022841m.g I 0.704
Bo3g039330 Brassica oleracea Bo3g039330 I 0.704
Bostr.25993s0113 Boechera stricta Bostr.25993s0113 I 0.704
Lus10032413.g Linum usitatissimum Lus10032413.g I 0.704
gene25123-v1.0-hybrid Fragaria vesca gene25123-v1.0-hybrid I 0.704
GRMZM2G030710 Zea mays GRMZM2G030710 I 0.704
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I 0.704
ARF11 Arabidopsis lyrata scaffold_403621.1 I 0.704
Thhalv10001365m.g Eutrema salsugineum Thhalv10001365m.g I 0.704
POPTR_0001s13110 Populus trichocarpa POPTR_0001s13110 I 0.701
30128.m008545 Ricinus communis 30128.m008545 I 0.701