TCM_017321 (Theobroma cacao)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 TCM_017321 T021519_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
FUS3
M06706_2.00
Arabidopsis thaliana
WNHWTGCATGYDHDW

WHDHRCATGCAWDNW
Dap-seq
OMalley et al.(2016)
FUS3_col_a
0.857 0.857
FUS3
M09773_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FUS3_Q2
0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY02917 B3 103 205
EOY02918 B3 103 205
EOY02919 B3 103 202

Links

Other B3 family TFs
Other Theobroma cacao TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Gorai.001G273500 Gossypium raimondii Gorai.001G273500 I 0.980
Pm016099 Prunus mume Pm016099 I 0.949
PRUPE_ppa021307mg Prunus persica PRUPE_ppa021307mg I 0.929
30131.m006860 Ricinus communis 30131.m006860 I 0.919
Ciclev10016085m.g Citrus clementina Ciclev10016085m.g I 0.918
orange1.1g041864m.g Citrus sinensis orange1.1g041864m.g I 0.909
evm.TU.supercontig_70.84 Carica papaya evm.TU.supercontig_70.84 I 0.900
Ca_05976 Cicer arietinum Ca_05976 I 0.897
MTR_7g083700 Medicago truncatula MTR_7g083700 I 0.897
GLYMA19G27336 Glycine max GLYMA19G27336 I 0.888
cassava11393.m1 Manihot esculenta cassava11393.m1 I 0.887
GLYMA16G05480 Glycine max GLYMA16G05480 I 0.878
POPTR_0017s08820 Populus trichocarpa POPTR_0017s08820 I 0.878
Cla009252 Citrullus lanatus Cla009252 I 0.876
POPTR_0001s32990 Populus trichocarpa POPTR_0001s32990 I 0.875
LjSGA_037319.1 Lotus japonicus LjSGA_037319.1 I 0.868
MDP0000268649 Malus domestica MDP0000268649 I 0.866
Bostr.0556s0351 Boechera stricta Bostr.0556s0351 I 0.857
FUS3 Arabidopsis thaliana AT3G26790 D 0.857
Thhalv10005481m.g Eutrema salsugineum Thhalv10005481m.g I 0.857
Bra032953 Brassica rapa Bra032953 I 0.847
Bo00285s530 Brassica oleracea Bo00285s530 I 0.847
FUS3 Arabidopsis lyrata fgenesh2_kg.5__447__AT3G26790.1 I 0.847
cassava14836.m1 Manihot esculenta cassava14836.m1 I 0.837
Lus10012572.g Linum usitatissimum Lus10012572.g I 0.837
Cagra.1841s0002 Capsella grandiflora Cagra.1841s0002 I 0.828
Carubv10019353m.g Capsella rubella Carubv10019353m.g I 0.828
Lus10041521.g Linum usitatissimum Lus10041521.g I 0.816
FUS3 Vitis vinifera VIT_14s0068g01290 I 0.778
Bo7g083910 Brassica oleracea Bo7g083910 I 0.758
mgf021117m Mimulus guttatus mgf021117m N 0.711