TCM_022729 (Theobroma cacao)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 TCM_022729 T021524_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY08368 B3 100 203

Links

Other B3 family TFs
Other Theobroma cacao TFs

283 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.949
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.939
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.939
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.929
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.919
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.919
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.919
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.909
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.909
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.899
PK04952.1 Cannabis sativa PK04952.1 I 0.899
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.889
30032.m000462 Ricinus communis 30032.m000462 N 0.889
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.889
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N 0.881
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.879
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.879
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.871
Bra005301 Brassica rapa Bra005301 N 0.869
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.869
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.869
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.869
Bo4g035110 Brassica oleracea Bo4g035110 N 0.869
Ca_25633 Cicer arietinum Ca_25633 I 0.869
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.859
Bo01079s020 Brassica oleracea Bo01079s020 N 0.859
Bra017262 Brassica rapa Bra017262 N 0.859
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.859
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.848
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.848
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.848
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.848
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.848
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.848
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.848
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.848
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.848
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.848
ARF31 Arabidopsis thaliana AT2G36080 N 0.848
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.848
Cla017937 Citrullus lanatus Cla017937 I 0.842
Bra001411 Brassica rapa Bra001411 N 0.838
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.838
MDP0000229742 Malus domestica MDP0000229742 N 0.838
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.838
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.838
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.838
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.838
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.838
OB12G13420 Oryza brachyantha OB12G13420 N 0.838
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.838
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.838
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.838
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.832
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.832
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.828
Si027632m.g Setaria italica Si027632m.g N 0.828
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.828
Bo3g064320 Brassica oleracea Bo3g064320 N 0.828
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.828
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.828
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.828
Ca_00826 Cicer arietinum Ca_00826 N 0.828
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.828
Bra005886 Brassica rapa Bra005886 N 0.828
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.828
mgf019085m Mimulus guttatus mgf019085m N 0.818
Bo9g176470 Brassica oleracea Bo9g176470 N 0.818
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.818
Bra034828 Brassica rapa Bra034828 N 0.818
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.818
Bo5g136360 Brassica oleracea Bo5g136360 N 0.818
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.818
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.818
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.818
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.812
Bo3g003800 Brassica oleracea Bo3g003800 N 0.812
OS11G0156000 Oryza sativa OS11G0156000 N 0.808
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.808
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.808
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.808
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.808
OBART11G03590 Oryza barthii OBART11G03590 N 0.808
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.808
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.808
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.808
GLYMA19G38340 Glycine max GLYMA19G38340 N 0.798
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.798
OB11G12920 Oryza brachyantha OB11G12920 N 0.798
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.798
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.798
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.798
OMERI11G03310 Oryza meridionalis OMERI11G03310 N 0.792
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.788
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.788
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.788
F775_02500 Aegilops tauschii F775_02500 N 0.788
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.786
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.782
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.782
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.778
Lus10004226.g Linum usitatissimum Lus10004226.g N 0.778
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.778
TCM_005014 Theobroma cacao TCM_005014 I 0.778
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.778
Pm024248 Prunus mume Pm024248 I 0.778
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.778
GSMUA_Achr9G02600_001 Musa acuminata GSMUA_Achr9G02600_001 I 0.778
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N 0.772
Bra041023 Brassica rapa Bra041023 N 0.772
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.772
mgf018965m Mimulus guttatus mgf018965m N 0.768
OS04G0581400 Oryza sativa OS04G0581400 I 0.768
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.768
TCM_015590 Theobroma cacao TCM_015590 I 0.768
OB03G11610 Oryza brachyantha OB03G11610 N 0.768
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.768
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.768
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.768
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.768
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.768
OBART04G22880 Oryza barthii OBART04G22880 I 0.768
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.768
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.768
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.768
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.768
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.768
F775_31255 Aegilops tauschii F775_31255 N 0.768
PK11025.1 Cannabis sativa PK11025.1 I 0.762
GSMUA_Achr3G19210_001 Musa acuminata GSMUA_Achr3G19210_001 N 0.762
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.758
Si036864m.g Setaria italica Si036864m.g N 0.758
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.758
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.758
Si011823m.g Setaria italica Si011823m.g N 0.758
OBART03G01650 Oryza barthii OBART03G01650 N 0.758
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.758
30076.m004471 Ricinus communis 30076.m004471 I 0.758
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.758
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.758
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.758
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.758
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.758
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.758
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.758
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.758
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.758
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.758
ONIVA12G03130 Oryza nivara ONIVA12G03130 N 0.758
LPERR12G03290 Leersia perrieri LPERR12G03290 N 0.758
Traes_2AL_25382F498 Triticum aestivum Traes_2AL_25382F498 N 0.758
ORGLA12G0033700 Oryza glaberrima ORGLA12G0033700 N 0.758
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.758
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.758
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.758
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.758
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.758
OGLUM12G04180 Oryza glumaepatula OGLUM12G04180 N 0.758
OS03G0120900 Oryza sativa OS03G0120900 N 0.758
BGIOSGA036599 Oryza indica BGIOSGA036599 N 0.758
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.758
ORUFI12G03970 Oryza rufipogon ORUFI12G03970 N 0.758
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.758
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.758
OBART12G03490 Oryza barthii OBART12G03490 N 0.758
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.758
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.758
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.758
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.758
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.747
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.747
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.747
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.747
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.747
Pm028725 Prunus mume Pm028725 N 0.747
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.747
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.747
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.747
30068.m002615 Ricinus communis 30068.m002615 I 0.747
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.747
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.747
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.747
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.747
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.747
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.747
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.747
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.747
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.747
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.747
PK21157.1 Cannabis sativa PK21157.1 I 0.747
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.747
Bra040478 Brassica rapa Bra040478 I 0.747
mgf023769m Mimulus guttatus mgf023769m N 0.747
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.743
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.743
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.740
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.737
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.737
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.737
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.737
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.737
Bo6g079210 Brassica oleracea Bo6g079210 N 0.737
Bra000434 Brassica rapa Bra000434 N 0.737
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.737
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.737
Bo4g197410 Brassica oleracea Bo4g197410 I 0.737
Si039972m.g Setaria italica Si039972m.g N 0.737
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.737
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.737
Cla006845 Citrullus lanatus Cla006845 I 0.737
Ca_01368 Cicer arietinum Ca_01368 I 0.737
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.737
Bo3g039420 Brassica oleracea Bo3g039420 N 0.733
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.733
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.733
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.733
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.733
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.733
NGA1 Arabidopsis thaliana AT2G46870 N 0.727
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.727
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.727
MDP0000138163 Malus domestica MDP0000138163 N 0.727
NGA2 Arabidopsis thaliana AT3G61970 N 0.727
Bra004501 Brassica rapa Bra004501 N 0.727
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.727
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.727
Sb08g003550 Sorghum bicolor Sb08g003550 N 0.727
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.727
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.727
Cla014858 Citrullus lanatus Cla014858 N 0.727
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.727
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.727
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.727
OS10G0537100 Oryza sativa OS10G0537100 N 0.727
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.727
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.727
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.727
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.727
OBART10G17010 Oryza barthii OBART10G17010 N 0.727
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.727
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.727
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.727
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.727
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.727
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.727
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.724
OB02G35380 Oryza brachyantha OB02G35380 I 0.723
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.723
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.723
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I 0.723
Si020241m.g Setaria italica Si020241m.g N 0.723
Bra003482 Brassica rapa Bra003482 N 0.723
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.723
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.720
OB10G24100 Oryza brachyantha OB10G24100 N 0.718
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.717
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.717
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I 0.717
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.717
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.717
Bra007646 Brassica rapa Bra007646 N 0.717
Bo8g097490 Brassica oleracea Bo8g097490 N 0.717
LPERR11G03050 Leersia perrieri LPERR11G03050 N 0.717
Bo4g099000 Brassica oleracea Bo4g099000 N 0.717
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.717
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.716
Bo4g006900 Brassica oleracea Bo4g006900 N 0.713
Si010849m.g Setaria italica Si010849m.g N 0.713
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.713
MDP0000288808 Malus domestica MDP0000288808 N 0.707
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N 0.707
mgf023686m Mimulus guttatus mgf023686m I 0.707
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.703
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.703
Bra014415 Brassica rapa Bra014415 N 0.703
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.703
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.703
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.703
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.703
OS02G0683500 Oryza sativa OS02G0683500 N 0.703
OBART02G28100 Oryza barthii OBART02G28100 N 0.703
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.703
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.703