TCM_041071 (Theobroma cacao)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 TCM_041071 T021547_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF3
M00852_2.00
Arabidopsis thaliana
NKGTYBNN

NNVRACMN
PBM
Franco-Zorrilla et al.(2014)
ETTIN
0.857 0.857
ARF2
M06714_2.00
Arabidopsis thaliana
NHTGTCKSHD

HDSMGACADN
Dap-seq
OMalley et al.(2016)
ARF2_col_v31
0.755 0.755
ARF8
M01697_2.00
Arabidopsis thaliana
NHTGTCGGN

NCCGACADN
PBM
Weirauch et al.(2014)
pTH8661
0.704 0.704
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY33060 B3 166 268
EOY33061 B3 166 268
EOY33062 B3 166 268

Links

Other B3 family TFs
Other Theobroma cacao TFs

701 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACOM023832 Anopheles coluzzii ACOM023832 N 0.000
ASIM_0001975501 Anisakis simplex ASIM_0001975501 N 0.000
Bra015737 Brassica rapa Bra015737 N 0.000
cassava32082.m1 Manihot esculenta cassava32082.m1 N 0.000
cassava33852.m1 Manihot esculenta cassava33852.m1 N 0.000
ENSCJAG00000034027 Callithrix jacchus ENSCJAG00000034027 N 0.000
ENSCSAVG00000005880 Ciona savignyi ENSCSAVG00000005880 N 0.000
ENSGMOG00000001211 Gadus morhua ENSGMOG00000001211 I 0.000
ENSNLEG00000007764 Nomascus leucogenys ENSNLEG00000007764 N 0.000
evm.TU.supercontig_70.18 Carica papaya evm.TU.supercontig_70.18 N 0.000
F775_22367 Aegilops tauschii F775_22367 N 0.000
F775_31416 Aegilops tauschii F775_31416 N 0.000
GL12242 Drosophila persimilis FBgn0149849 N 0.000
GD20218 Drosophila simulans FBgn0191696 N 0.000
gene11760-v1.0-hybrid Fragaria vesca gene11760-v1.0-hybrid N 0.000
Genemark1.2983_g Coccomyxa subellipsoidea C169 Genemark1.2983_g N 0.000
GG.C169_S05_00378 Chlorella vulgaris GG.C169_S05_00378 N 0.000
HHAL003716-PA Halyomorpha halys HHAL003716-PA N 0.000
Lus10008531.g Linum usitatissimum Lus10008531.g N 0.000
maker-nMf.1.1.scaf01260-augustus-gene-0.7 Meloidogyne floridensis maker-nMf.1.1.scaf01260-augustus-gene-0.7 N 0.000
MESCA003685 Megaselia scalaris MESCA003685 N 0.000
MLOC_7381 Hordeum vulgare MLOC_7381 N 0.000
Myotis_brandtii_ARID2_10029491 Myotis brandtii Myotis_brandtii_ARID2_10029491 N 0.000
Myotis_brandtii_KDM5D_10002268 Myotis brandtii Myotis_brandtii_KDM5D_10002268 N 0.000
NV31651 Nasonia vitripennis NV31651 N 0.000
orange1.1g009744m.g Citrus sinensis orange1.1g009744m.g I 0.000
ORGLA07G0233500 Oryza glaberrima ORGLA07G0233500 N 0.000
OS06G0622300 Oryza sativa OS06G0622300 I 0.000
Pavir.Da00612 Panicum virgatum Pavir.Da00612 N 0.000
Pavir.J25952 Panicum virgatum Pavir.J25952 N 0.000
PDK_20s1315202g001 Phoenix dactylifera PDK_20s1315202g001 N 0.000
PGSC0003DMG400047019 Solanum tuberosum PGSC0003DMG400047019 N 0.000
PGSC0003DMG401018896 Solanum tuberosum PGSC0003DMG401018896 N 0.000
PHUM027610 Pediculus humanus PHUM027610 N 0.000
SapurV1A.0216s0430 Salix purpurea SapurV1A.0216s0430 N 0.000
SapurV1A.2929s0030 Salix purpurea SapurV1A.2929s0030 N 0.000
Sjc_0111140 Schistosoma japonicum Sjc_0111140 N 0.000
SMTD_0000131801 Schistosoma mattheei SMTD_0000131801 N 0.000
Solyc12g038740.1 Solanum lycopersicum Solyc12g038740.1 N 0.000
SPER_0000246801 Spirometra erinaceieuropaei SPER_0000246801 N 0.000
SPER_0000445801 Spirometra erinaceieuropaei SPER_0000445801 N 0.000
SPER_0003392901 Spirometra erinaceieuropaei SPER_0003392901 N 0.000
SPER_0003827801 Spirometra erinaceieuropaei SPER_0003827801 N 0.000
SPU_003500 Strongylocentrotus purpuratus SPU_003500 N 0.000
SPU_009801 Strongylocentrotus purpuratus SPU_009801 N 0.000
SROB_0001561301 Schistosoma rodhaini SROB_0001561301 N 0.000
Traes_2AS_40ED2C7BC Triticum aestivum Traes_2AS_40ED2C7BC N 0.000
TRIUR3_29596 Triticum urartu TRIUR3_29596 N 0.000