CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_2AL_98457FFEE
(
Triticum aestivum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Traes_2AL_98457FFEE
T021580_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARF8
M01697_2.00
Arabidopsis thaliana
NHTGTCGGN
NCCGACADN
PBM
Weirauch et al.(2014)
pTH8661
0.705
0.705
ARF5
M06701_2.00
Arabidopsis thaliana
WYTTGTCGGN
NCCGACAARW
Dap-seq
OMalley et al.(2016)
MP_col
0.705
0.705
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_2AL_98457FFEE.1
B3
30
95
FCKNLTASDTSTHGGFSVPRRAAEKLFPQLDFSMQPPNQELIVRDLHDNMLTFRHIYRGRVECCLT
Links
Other
B3
family TFs
Other
Triticum aestivum
TFs
168 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_55345
Hordeum vulgare
MLOC_55345
I
0.869
GRMZM2G086949
Zea mays
GRMZM2G086949
I
0.869
Sb06g031900
Sorghum bicolor
Sb06g031900
I
0.869
Traes_2AL_05ECC440C
Triticum aestivum
Traes_2AL_05ECC440C
I
0.869
Traes_2DL_FBE64209C
Triticum aestivum
Traes_2DL_FBE64209C
I
0.869
GRMZM2G034840
Zea mays
GRMZM2G034840
I
0.869
Traes_2BL_E322FD546
Triticum aestivum
Traes_2BL_E322FD546
I
0.869
BGIOSGA014158
Oryza indica
BGIOSGA014158
I
0.869
Pavir.Ga00157
Panicum virgatum
Pavir.Ga00157
I
0.836
LjSGA_022975.2
Lotus japonicus
LjSGA_022975.2
I
0.808
PGSC0003DMG400003771
Solanum tuberosum
PGSC0003DMG400003771
I
0.803
MP
Vitis vinifera
VIT_18s0001g13930
I
0.803
POPTR_0002s02630
Populus trichocarpa
POPTR_0002s02630
I
0.803
Eucgr.F02090
Eucalyptus grandis
Eucgr.F02090
I
0.803
MDP0000211459
Malus domestica
MDP0000211459
I
0.803
MDP0000143749
Malus domestica
MDP0000143749
I
0.803
Lus10024320.g
Linum usitatissimum
Lus10024320.g
I
0.803
Gorai.002G124400
Gossypium raimondii
Gorai.002G124400
I
0.803
Solyc04g081240.2
Solanum lycopersicum
Solyc04g081240.2
I
0.803
cassava45001.m1
Manihot esculenta
cassava45001.m1
I
0.787
POPTR_0006s14070
Populus trichocarpa
POPTR_0006s14070
I
0.787
GSMUA_Achr8G23850_001
Musa acuminata
GSMUA_Achr8G23850_001
I
0.787
mgf025960m
Mimulus guttatus
mgf025960m
I
0.787
POPTR_0018s14300
Populus trichocarpa
POPTR_0018s14300
I
0.787
29739.m003713
Ricinus communis
29739.m003713
I
0.787
evm.TU.supercontig_26.25
Carica papaya
evm.TU.supercontig_26.25
I
0.787
Cla021128
Citrullus lanatus
Cla021128
I
0.787
SapurV1A.4298s0010
Salix purpurea
SapurV1A.4298s0010
I
0.782
Gorai.009G037100
Gossypium raimondii
Gorai.009G037100
I
0.770
OS08G0520550
Oryza sativa
OS08G0520550
I
0.770
ORUFI08G23260
Oryza rufipogon
ORUFI08G23260
I
0.770
ORGLA02G0031900
Oryza glaberrima
ORGLA02G0031900
I
0.770
OPUNC08G18850
Oryza punctata
OPUNC08G18850
I
0.770
ORGLA08G0183900
Oryza glaberrima
ORGLA08G0183900
I
0.770
ORUFI02G03320
Oryza rufipogon
ORUFI02G03320
I
0.770
Sb10g029130
Sorghum bicolor
Sb10g029130
I
0.770
OS02G0141100
Oryza sativa
OS02G0141100
I
0.770
Traes_7AL_F36D340F4
Triticum aestivum
Traes_7AL_F36D340F4
I
0.770
F775_07729
Aegilops tauschii
F775_07729
I
0.770
VIT_11s0016g00640
Vitis vinifera
VIT_11s0016g00640
I
0.770
Ca_10748
Cicer arietinum
Ca_10748
I
0.770
Cla019844
Citrullus lanatus
Cla019844
I
0.770
Pm008963
Prunus mume
Pm008963
I
0.770
TRIUR3_25750
Triticum urartu
TRIUR3_25750
I
0.770
Cucsa.152170
Cucumis sativus
Cucsa.152170
I
0.770
AMTR_s00007p00267580
Amborella trichopoda
AMTR_s00007p00267580
I
0.770
OPUNC02G02660
Oryza punctata
OPUNC02G02660
I
0.770
mgf012918m
Mimulus guttatus
mgf012918m
I
0.770
Traes_7DL_343A252DC
Triticum aestivum
Traes_7DL_343A252DC
I
0.770
evm.TU.supercontig_115.30
Carica papaya
evm.TU.supercontig_115.30
I
0.770
PRUPE_ppa000479mg
Prunus persica
PRUPE_ppa000479mg
I
0.770
LPERR02G03100
Leersia perrieri
LPERR02G03100
I
0.770
MTR_1g024025
Medicago truncatula
MTR_1g024025
I
0.770
ONIVA08G23730
Oryza nivara
ONIVA08G23730
I
0.770
OB02G13010
Oryza brachyantha
OB02G13010
I
0.770
Lus10033635.g
Linum usitatissimum
Lus10033635.g
I
0.770
PDK_20s1375001g001
Phoenix dactylifera
PDK_20s1375001g001
I
0.770
BGIOSGA026655
Oryza indica
BGIOSGA026655
I
0.770
GRMZM2G317900
Zea mays
GRMZM2G317900
I
0.770
MDP0000185253
Malus domestica
MDP0000185253
I
0.770
OBART02G03410
Oryza barthii
OBART02G03410
I
0.770
BRADI1G34340
Brachypodium distachyon
BRADI1G34340
I
0.770
Gorai.010G091300
Gossypium raimondii
Gorai.010G091300
I
0.770
ONIVA02G03290
Oryza nivara
ONIVA02G03290
I
0.770
OGLUM08G22050
Oryza glumaepatula
OGLUM08G22050
I
0.770
OLONG_021742
Oryza longistaminata
OLONG_021742
I
0.770
OMERI02G04100
Oryza meridionalis
OMERI02G04100
I
0.770
OMERI02G01870
Oryza meridionalis
OMERI02G01870
I
0.770
OBART08G20780
Oryza barthii
OBART08G20780
I
0.770
OGLUM02G03280
Oryza glumaepatula
OGLUM02G03280
I
0.770
Cucsa.117420
Cucumis sativus
Cucsa.117420
I
0.769
gene30394-v1.0-hybrid
Fragaria vesca
gene30394-v1.0-hybrid
I
0.754
Pavir.Gb00117
Panicum virgatum
Pavir.Gb00117
I
0.754
LPERR08G17530
Leersia perrieri
LPERR08G17530
I
0.754
Pavir.Fa00483
Panicum virgatum
Pavir.Fa00483
I
0.754
MDP0000268306
Malus domestica
MDP0000268306
I
0.754
SapurV1A.0030s0180
Salix purpurea
SapurV1A.0030s0180
I
0.754
Cucsa.047990
Cucumis sativus
Cucsa.047990
I
0.754
ARF6
Vitis vinifera
VIT_10s0003g04100
I
0.754
Pavir.Fb01896
Panicum virgatum
Pavir.Fb01896
I
0.754
Cla009963
Citrullus lanatus
Cla009963
I
0.754
GSMUA_Achr11G01610_001
Musa acuminata
GSMUA_Achr11G01610_001
I
0.754
cassava29104.valid.m1
Manihot esculenta
cassava29104.valid.m1
I
0.754
POPTR_0011s09450
Populus trichocarpa
POPTR_0011s09450
I
0.754
GSMUA_Achr5G05010_001
Musa acuminata
GSMUA_Achr5G05010_001
I
0.754
Gorai.009G152700
Gossypium raimondii
Gorai.009G152700
I
0.754
Sb04g003240
Sorghum bicolor
Sb04g003240
I
0.754
Pm010467
Prunus mume
Pm010467
I
0.754
SapurV1A.0355s0030
Salix purpurea
SapurV1A.0355s0030
I
0.754
MTR_4g124900
Medicago truncatula
MTR_4g124900
I
0.754
PRUPE_ppa000708mg
Prunus persica
PRUPE_ppa000708mg
I
0.754
PRUPE_ppa001179mg
Prunus persica
PRUPE_ppa001179mg
I
0.754
cassava32201.m1
Manihot esculenta
cassava32201.m1
I
0.754
Sb07g027080
Sorghum bicolor
Sb07g027080
I
0.754
Si013155m.g
Setaria italica
Si013155m.g
I
0.754
TCM_001906
Theobroma cacao
TCM_001906
I
0.754
Pm027119
Prunus mume
Pm027119
I
0.754
cassava29103.valid.m1
Manihot esculenta
cassava29103.valid.m1
I
0.754
PK26077.1
Cannabis sativa
PK26077.1
I
0.754
cassava2408.valid.m1
Manihot esculenta
cassava2408.valid.m1
I
0.754
Carubv10000065m.g
Capsella rubella
Carubv10000065m.g
I
0.754
29599.m000177
Ricinus communis
29599.m000177
I
0.754
TCM_029410
Theobroma cacao
TCM_029410
I
0.754
LjSGA_026543.1
Lotus japonicus
LjSGA_026543.1
I
0.746
evm.TU.supercontig_108.15
Carica papaya
evm.TU.supercontig_108.15
I
0.746
Bra025720
Brassica rapa
Bra025720
I
0.738
mgf005961m
Mimulus guttatus
mgf005961m
I
0.738
cassava30266.valid.m1
Manihot esculenta
cassava30266.valid.m1
I
0.738
Lus10007386.g
Linum usitatissimum
Lus10007386.g
I
0.738
Gorai.008G054600
Gossypium raimondii
Gorai.008G054600
I
0.738
Lus10010969.g
Linum usitatissimum
Lus10010969.g
I
0.738
MDP0000294251
Malus domestica
MDP0000294251
I
0.738
Lus10031354.g
Linum usitatissimum
Lus10031354.g
I
0.738
Aquca_002_01425
Aquilegia coerulea
Aquca_002_01425
I
0.738
BRADI4G01730
Brachypodium distachyon
BRADI4G01730
I
0.738
cassava35541.valid.m1
Manihot esculenta
cassava35541.valid.m1
I
0.738
AMTR_s00092p00072950
Amborella trichopoda
AMTR_s00092p00072950
I
0.738
Sb08g021460
Sorghum bicolor
Sb08g021460
I
0.738
GRMZM2G102845
Zea mays
GRMZM2G102845
I
0.738
MDP0000232417
Malus domestica
MDP0000232417
I
0.738
TCM_017488
Theobroma cacao
TCM_017488
I
0.738
ARF19
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1001739
N
0.738
OB12G25550
Oryza brachyantha
OB12G25550
I
0.738
GSMUA_Achr3G10240_001
Musa acuminata
GSMUA_Achr3G10240_001
I
0.738
chr6.CM0420.10.nd
Lotus japonicus
chr6.CM0420.10.nd
N
0.738
MTR_2g043250
Medicago truncatula
MTR_2g043250
I
0.738
MTR_5g076270
Medicago truncatula
MTR_5g076270
I
0.738
GRMZM2G081158
Zea mays
GRMZM2G081158
I
0.738
cassava30265.valid.m1
Manihot esculenta
cassava30265.valid.m1
I
0.738
TRIUR3_19224
Triticum urartu
TRIUR3_19224
I
0.738
VIT_03s0167g00010
Vitis vinifera
VIT_03s0167g00010
I
0.738
VIT_00s1203g00010
Vitis vinifera
VIT_00s1203g00010
I
0.738
F775_09095
Aegilops tauschii
F775_09095
I
0.738
Ca_15694
Cicer arietinum
Ca_15694
I
0.738
29769.m000463
Ricinus communis
29769.m000463
I
0.738
Bo5g027250
Brassica oleracea
Bo5g027250
I
0.738
OMERI04G24630
Oryza meridionalis
OMERI04G24630
I
0.727
MLOC_14584
Hordeum vulgare
MLOC_14584
I
0.721
GSMUA_Achr5G00590_001
Musa acuminata
GSMUA_Achr5G00590_001
I
0.721
OB06G15720
Oryza brachyantha
OB06G15720
I
0.721
GLYMA08G03141
Glycine max
GLYMA08G03141
I
0.721
Traes_7BS_F44A273F8
Triticum aestivum
Traes_7BS_F44A273F8
I
0.721
Traes_7AS_582E3076D
Triticum aestivum
Traes_7AS_582E3076D
I
0.721
SapurV1A.0147s0210
Salix purpurea
SapurV1A.0147s0210
I
0.721
Traes_7DS_1948388F8
Triticum aestivum
Traes_7DS_1948388F8
I
0.721
POPTR_0017s01870
Populus trichocarpa
POPTR_0017s01870
I
0.721
GSMUA_Achr11G25770_001
Musa acuminata
GSMUA_Achr11G25770_001
I
0.721
PGSC0003DMG401018664
Solanum tuberosum
PGSC0003DMG401018664
I
0.721
Aquca_022_00246
Aquilegia coerulea
Aquca_022_00246
I
0.721
ORUFI06G26570
Oryza rufipogon
ORUFI06G26570
I
0.720
SapurV1A.0289s0180
Salix purpurea
SapurV1A.0289s0180
I
0.705
Traes_7BL_66296695F
Triticum aestivum
Traes_7BL_66296695F
I
0.705
MLOC_58330
Hordeum vulgare
MLOC_58330
I
0.705
ARF8
Arabidopsis thaliana
AT5G37020
D
0.705
SELMODRAFT_179736
Selaginella moellendorffii
SELMODRAFT_179736
I
0.705
Bo4g136370
Brassica oleracea
Bo4g136370
I
0.705
ARF8
Arabidopsis lyrata
fgenesh2_kg.7__3131__AT5G37020.1
I
0.705
Bra028110
Brassica rapa
Bra028110
I
0.705
BRADI1G46602
Brachypodium distachyon
BRADI1G46602
I
0.705
SELMODRAFT_451392
Selaginella moellendorffii
SELMODRAFT_451392
I
0.705
ARF5
Arabidopsis thaliana
AT1G19850
D
0.705
Cucsa.173470
Cucumis sativus
Cucsa.173470
I
0.705
Lus10017640.g
Linum usitatissimum
Lus10017640.g
I
0.705
Cla009258
Citrullus lanatus
Cla009258
I
0.705
Ca_05025
Cicer arietinum
Ca_05025
I
0.705
Traes_7DL_C89614A4D
Triticum aestivum
Traes_7DL_C89614A4D
I
0.705
TRIUR3_26420
Triticum urartu
TRIUR3_26420
I
0.705
Lus10033597.g
Linum usitatissimum
Lus10033597.g
I
0.705