CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_17624
(
Cicer arietinum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Ca_17624
T021969_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARF16
M06708_2.00
Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA
Dap-seq
OMalley et al.(2016)
ARF16_col_b
0.732
0.732
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_17624
B3
117
219
FAKILTQSDANNGGGFSCPRYCAEKLFPCLDYSTSPPVQDIFPKDIHDQKWQFKHIYRGTPKRHLLTTGWSQFVTHKKLVAGDSIVFLKAENGDIRFGIRRAR
Links
Other
B3
family TFs
Other
Cicer arietinum
TFs
148 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_1g094960
Medicago truncatula
MTR_1g094960
I
0.773
PGSC0003DMG400021560
Solanum tuberosum
PGSC0003DMG400021560
I
0.763
Cucsa.124410
Cucumis sativus
Cucsa.124410
I
0.763
Ciclev10011194m.g
Citrus clementina
Ciclev10011194m.g
I
0.763
Gorai.006G166400
Gossypium raimondii
Gorai.006G166400
I
0.763
MDP0000750392
Malus domestica
MDP0000750392
I
0.763
PRUPE_ppa002195mg
Prunus persica
PRUPE_ppa002195mg
I
0.763
orange1.1g005075m.g
Citrus sinensis
orange1.1g005075m.g
I
0.763
cassava5984.valid.m1
Manihot esculenta
cassava5984.valid.m1
I
0.763
Pm030120
Prunus mume
Pm030120
I
0.763
Cla018574
Citrullus lanatus
Cla018574
I
0.763
TCM_022163
Theobroma cacao
TCM_022163
I
0.763
Solyc09g007810.2
Solanum lycopersicum
Solyc09g007810.2
I
0.763
cassava23558.valid.m1
Manihot esculenta
cassava23558.valid.m1
I
0.763
30078.m002329
Ricinus communis
30078.m002329
I
0.763
GLYMA13G20382
Glycine max
GLYMA13G20382
I
0.763
gene09733-v1.0-hybrid
Fragaria vesca
gene09733-v1.0-hybrid
I
0.763
GLYMA10G06080
Glycine max
GLYMA10G06080
I
0.763
Gorai.012G004800
Gossypium raimondii
Gorai.012G004800
I
0.753
Lus10019940.g
Linum usitatissimum
Lus10019940.g
I
0.753
Lus10026510.g
Linum usitatissimum
Lus10026510.g
I
0.753
Eucgr.K01240
Eucalyptus grandis
Eucgr.K01240
I
0.753
orange1.1g005482m.g
Citrus sinensis
orange1.1g005482m.g
I
0.753
cassava852.valid.m1
Manihot esculenta
cassava852.valid.m1
I
0.753
cassava37879.valid.m1
Manihot esculenta
cassava37879.valid.m1
I
0.753
mgf005300m
Mimulus guttatus
mgf005300m
I
0.753
Ciclev10030860m.g
Citrus clementina
Ciclev10030860m.g
I
0.753
PK17007.1
Cannabis sativa
PK17007.1
I
0.753
GLYMA19G36571
Glycine max
GLYMA19G36571
I
0.753
GSMUA_Achr8G18930_001
Musa acuminata
GSMUA_Achr8G18930_001
I
0.753
GLYMA10G35481
Glycine max
GLYMA10G35481
I
0.753
mgf024607m
Mimulus guttatus
mgf024607m
I
0.742
Pm031275
Prunus mume
Pm031275
I
0.742
GLYMA20G32040
Glycine max
GLYMA20G32040
I
0.742
Eucgr.J00923
Eucalyptus grandis
Eucgr.J00923
I
0.742
MDP0000221322
Malus domestica
MDP0000221322
I
0.742
SapurV1A.0216s0160
Salix purpurea
SapurV1A.0216s0160
I
0.742
POPTR_0008s03890
Populus trichocarpa
POPTR_0008s03890
I
0.742
PRUPE_ppa002082mg
Prunus persica
PRUPE_ppa002082mg
I
0.742
GLYMA12G29720
Glycine max
GLYMA12G29720
I
0.742
POPTR_0848s00200
Populus trichocarpa
POPTR_0848s00200
I
0.742
SapurV1A.0518s0120
Salix purpurea
SapurV1A.0518s0120
I
0.742
POPTR_0010s23000
Populus trichocarpa
POPTR_0010s23000
I
0.742
POPTR_0004s22130
Populus trichocarpa
POPTR_0004s22130
I
0.742
Eucgr.G02838
Eucalyptus grandis
Eucgr.G02838
I
0.742
Gorai.013G267100
Gossypium raimondii
Gorai.013G267100
I
0.742
MTR_7g101280
Medicago truncatula
MTR_7g101280
I
0.742
ARF16
Vitis vinifera
VIT_13s0019g04380
I
0.742
VIT_08s0040g01810
Vitis vinifera
VIT_08s0040g01810
I
0.742
MDP0000131481
Malus domestica
MDP0000131481
I
0.742
MTR_0041s0110
Medicago truncatula
MTR_0041s0110
I
0.742
evm.TU.supercontig_53.88
Carica papaya
evm.TU.supercontig_53.88
I
0.742
ARF10
Vitis vinifera
VIT_06s0004g02750
I
0.742
evm.TU.supercontig_65.4
Carica papaya
evm.TU.supercontig_65.4
I
0.742
TCM_042067
Theobroma cacao
TCM_042067
I
0.732
Bra011162
Brassica rapa
Bra011162
I
0.732
chr3.LjT10E18.60.nc
Lotus japonicus
chr3.LjT10E18.60.nc
I
0.732
Bo1g014600
Brassica oleracea
Bo1g014600
I
0.732
ARF16
Arabidopsis lyrata
scaffold_701217.1
I
0.732
TCM_043157
Theobroma cacao
TCM_043157
I
0.732
Thhalv10024601m.g
Eutrema salsugineum
Thhalv10024601m.g
I
0.732
Ca_17136
Cicer arietinum
Ca_17136
I
0.732
27538.m000327
Ricinus communis
27538.m000327
I
0.732
SapurV1A.0986s0010
Salix purpurea
SapurV1A.0986s0010
I
0.732
Pm018533
Prunus mume
Pm018533
I
0.732
ARF16
Arabidopsis thaliana
AT4G30080
D
0.732
Cagra.1744s0020
Capsella grandiflora
Cagra.1744s0020
I
0.732
PRUPE_ppa002710mg
Prunus persica
PRUPE_ppa002710mg
I
0.732
Cla013979
Citrullus lanatus
Cla013979
I
0.732
GSMUA_Achr4G18240_001
Musa acuminata
GSMUA_Achr4G18240_001
I
0.732
GSMUA_Achr11G22870_001
Musa acuminata
GSMUA_Achr11G22870_001
I
0.732
GLYMA13G40030
Glycine max
GLYMA13G40030
I
0.732
SapurV1A.0049s0400
Salix purpurea
SapurV1A.0049s0400
I
0.732
gene16844-v1.0-hybrid
Fragaria vesca
gene16844-v1.0-hybrid
I
0.732
Carubv10004220m.g
Capsella rubella
Carubv10004220m.g
I
0.732
SapurV1A.0657s0050
Salix purpurea
SapurV1A.0657s0050
I
0.732
Cucsa.137650
Cucumis sativus
Cucsa.137650
I
0.732
Bostr.7867s0859
Boechera stricta
Bostr.7867s0859
I
0.732
BRADI3G49320
Brachypodium distachyon
BRADI3G49320
I
0.729
Pavir.Da00107
Panicum virgatum
Pavir.Da00107
I
0.722
Gorai.009G107800
Gossypium raimondii
Gorai.009G107800
I
0.722
gene23280-v1.0-hybrid
Fragaria vesca
gene23280-v1.0-hybrid
I
0.722
Pavir.J26437
Panicum virgatum
Pavir.J26437
I
0.722
Aquca_030_00152
Aquilegia coerulea
Aquca_030_00152
I
0.722
Solyc11g069500.1
Solanum lycopersicum
Solyc11g069500.1
I
0.722
ONIVA06G28270
Oryza nivara
ONIVA06G28270
I
0.722
GLYMA11G20490
Glycine max
GLYMA11G20490
I
0.722
OPUNC06G22960
Oryza punctata
OPUNC06G22960
I
0.722
BRADI1G33160
Brachypodium distachyon
BRADI1G33160
I
0.722
Bra024109
Brassica rapa
Bra024109
I
0.722
ORUFI06G27120
Oryza rufipogon
ORUFI06G27120
I
0.722
OMERI06G25370
Oryza meridionalis
OMERI06G25370
I
0.722
GLYMA12G08110
Glycine max
GLYMA12G08110
I
0.722
MTR_2g094570
Medicago truncatula
MTR_2g094570
I
0.722
MTR_1g064430
Medicago truncatula
MTR_1g064430
I
0.722
OB06G32920
Oryza brachyantha
OB06G32920
I
0.722
OBART06G25230
Oryza barthii
OBART06G25230
I
0.722
Ca_26121
Cicer arietinum
Ca_26121
I
0.722
OGLUM06G26560
Oryza glumaepatula
OGLUM06G26560
I
0.722
ARF18
Oryza sativa
OS06G0685700
I
0.722
ORGLA06G0209500
Oryza glaberrima
ORGLA06G0209500
I
0.722
Sb10g027790
Sorghum bicolor
Sb10g027790
I
0.722
ARF10
Arabidopsis thaliana
AT2G28350
I
0.722
AC207656.3_FG002
Zea mays
AC207656.3_FG002
I
0.722
Ca_02541
Cicer arietinum
Ca_02541
I
0.722
POPTR_0016s09150
Populus trichocarpa
POPTR_0016s09150
I
0.722
Si005991m.g
Setaria italica
Si005991m.g
I
0.722
Bo7g114200
Brassica oleracea
Bo7g114200
I
0.722
PGSC0003DMG400008081
Solanum tuberosum
PGSC0003DMG400008081
I
0.719
mgf016139m
Mimulus guttatus
mgf016139m
I
0.719
Gorai.003G142500
Gossypium raimondii
Gorai.003G142500
I
0.711
Traes_2BL_A1A475B0F
Triticum aestivum
Traes_2BL_A1A475B0F
I
0.711
Bra011955
Brassica rapa
Bra011955
I
0.711
Bostr.27991s0089
Boechera stricta
Bostr.27991s0089
I
0.711
MTR_7g101275
Medicago truncatula
MTR_7g101275
I
0.711
Lus10021467.g
Linum usitatissimum
Lus10021467.g
I
0.711
Lus10023519.g
Linum usitatissimum
Lus10023519.g
I
0.711
Thhalv10016329m.g
Eutrema salsugineum
Thhalv10016329m.g
I
0.711
ARF10
Arabidopsis lyrata
fgenesh2_kg.4__731__AT2G28350.1
I
0.711
Cagra.1876s0007
Capsella grandiflora
Cagra.1876s0007
I
0.711
Lus10040403.g
Linum usitatissimum
Lus10040403.g
I
0.711
Carubv10022755m.g
Capsella rubella
Carubv10022755m.g
I
0.711
MTR_4g058930
Medicago truncatula
MTR_4g058930
I
0.711
MLOC_64795
Hordeum vulgare
MLOC_64795
I
0.701
GRMZM2G081406
Zea mays
GRMZM2G081406
I
0.701
Bo4g071620
Brassica oleracea
Bo4g071620
I
0.701
BRADI3G28950
Brachypodium distachyon
BRADI3G28950
I
0.701
PK13064.1
Cannabis sativa
PK13064.1
I
0.701
BGIOSGA008657
Oryza indica
BGIOSGA008657
I
0.701
MLOC_77438
Hordeum vulgare
MLOC_77438
I
0.701
LPERR02G20290
Leersia perrieri
LPERR02G20290
I
0.701
OLONG_021130
Oryza longistaminata
OLONG_021130
I
0.701
Sb01g019130
Sorghum bicolor
Sb01g019130
I
0.701
POPTR_0006s12930
Populus trichocarpa
POPTR_0006s12930
I
0.701
mgf000336m
Mimulus guttatus
mgf000336m
I
0.701
Sb04g026610
Sorghum bicolor
Sb04g026610
I
0.701
Si016509m.g
Setaria italica
Si016509m.g
I
0.701
27494.m000045
Ricinus communis
27494.m000045
I
0.701
Si034525m.g
Setaria italica
Si034525m.g
I
0.701
ARF8
Oryza sativa
OS02G0628600
I
0.701
ORUFI02G26180
Oryza rufipogon
ORUFI02G26180
I
0.701
OGLUM02G25270
Oryza glumaepatula
OGLUM02G25270
I
0.701
Gorai.011G238900
Gossypium raimondii
Gorai.011G238900
I
0.701
OMERI02G24320
Oryza meridionalis
OMERI02G24320
I
0.701
ONIVA02G27180
Oryza nivara
ONIVA02G27180
I
0.701
ORGLA02G0215100
Oryza glaberrima
ORGLA02G0215100
I
0.701
OPUNC02G22610
Oryza punctata
OPUNC02G22610
I
0.701
Lus10016091.g
Linum usitatissimum
Lus10016091.g
I
0.701