Cla001927 (Citrullus lanatus)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Cla001927 T021985_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla001927 B3 169 270
Cla001927 B3 624 668

Links

Other B3 family TFs
Other Citrullus lanatus TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.183410 Cucumis sativus Cucsa.183410 N 0.985
Ciclev10000491m.g Citrus clementina Ciclev10000491m.g N 0.963
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I 0.922
29609.m000587 Ricinus communis 29609.m000587 N 0.919
Lus10024455.g Linum usitatissimum Lus10024455.g N 0.912
cassava11453.m1 Manihot esculenta cassava11453.m1 N 0.904
cassava11454.m1 Manihot esculenta cassava11454.m1 N 0.904
TCM_027113 Theobroma cacao TCM_027113 I 0.904
cassava7098.valid.m1 Manihot esculenta cassava7098.valid.m1 N 0.904
cassava7099.valid.m1 Manihot esculenta cassava7099.valid.m1 N 0.904
PRUPE_ppa002394mg Prunus persica PRUPE_ppa002394mg N 0.904
cassava11456.m1 Manihot esculenta cassava11456.m1 N 0.904
cassava11455.m1 Manihot esculenta cassava11455.m1 N 0.904
POPTR_0003s00890 Populus trichocarpa POPTR_0003s00890 N 0.897
ARF1 Arabidopsis thaliana AT1G59750 N 0.890
SapurV1A.0225s0120 Salix purpurea SapurV1A.0225s0120 N 0.890
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.890
Lus10007440.g Linum usitatissimum Lus10007440.g N 0.890
ARF1 Arabidopsis lyrata fgenesh2_kg.2__468__AT1G59750.1 N 0.882
Bostr.10040s0256 Boechera stricta Bostr.10040s0256 N 0.882
GLYMA12G28550 Glycine max GLYMA12G28550 N 0.875
Bo1g090350 Brassica oleracea Bo1g090350 N 0.875
Bra035427 Brassica rapa Bra035427 N 0.875
Cagra.0996s0001 Capsella grandiflora Cagra.0996s0001 N 0.875
GLYMA07G40270 Glycine max GLYMA07G40270 N 0.875
Carubv10022415m.g Capsella rubella Carubv10022415m.g N 0.875
Thhalv10023326m.g Eutrema salsugineum Thhalv10023326m.g N 0.868
Solyc01g103050.2 Solanum lycopersicum Solyc01g103050.2 N 0.868
Gorai.011G091100 Gossypium raimondii Gorai.011G091100 N 0.868
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I 0.868
OGLUM02G20880 Oryza glumaepatula OGLUM02G20880 N 0.860
Sb04g022830 Sorghum bicolor Sb04g022830 N 0.853
Bo4g083590 Brassica oleracea Bo4g083590 N 0.853
mgf006427m Mimulus guttatus mgf006427m N 0.845
TRIUR3_33501 Triticum urartu TRIUR3_33501 N 0.838
Traes_2DL_A86E54838 Triticum aestivum Traes_2DL_A86E54838 N 0.838
Traes_2AL_89543BA1A Triticum aestivum Traes_2AL_89543BA1A N 0.838
VIT_18s0089g00910 Vitis vinifera VIT_18s0089g00910 N 0.824
ONIVA02G22590 Oryza nivara ONIVA02G22590 N 0.816
OPUNC02G18520 Oryza punctata OPUNC02G18520 N 0.816
OMERI02G20310 Oryza meridionalis OMERI02G20310 N 0.816
OLONG_012362 Oryza longistaminata OLONG_012362 N 0.816
OBART02G20600 Oryza barthii OBART02G20600 N 0.816
BGIOSGA008429 Oryza indica BGIOSGA008429 N 0.816
ORUFI02G21640 Oryza rufipogon ORUFI02G21640 N 0.816
ORGLA02G0176700 Oryza glaberrima ORGLA02G0176700 N 0.816
ARF7 Oryza sativa OS02G0557200 N 0.816
AMTR_s00021p00221770 Amborella trichopoda AMTR_s00021p00221770 N 0.779
Cla015243 Citrullus lanatus Cla015243 N 0.750
29742.m001397 Ricinus communis 29742.m001397 N 0.750
OPUNC12G10620 Oryza punctata OPUNC12G10620 N 0.735
OGLUM12G13560 Oryza glumaepatula OGLUM12G13560 N 0.735
ONIVA12G12070 Oryza nivara ONIVA12G12070 N 0.735
OMERI12G08550 Oryza meridionalis OMERI12G08550 N 0.735
OBART12G11990 Oryza barthii OBART12G11990 N 0.735
ORGLA12G0109100 Oryza glaberrima ORGLA12G0109100 N 0.735
ARF24 Oryza sativa OS12G0479400 N 0.735
ORUFI12G13110 Oryza rufipogon ORUFI12G13110 N 0.735
OLONG_019549 Oryza longistaminata OLONG_019549 N 0.735
BGIOSGA036199 Oryza indica BGIOSGA036199 N 0.735
GSMUA_Achr6G16450_001 Musa acuminata GSMUA_Achr6G16450_001 N 0.735
Cagra.1226s0063 Capsella grandiflora Cagra.1226s0063 N 0.728
Carubv10006513m.g Capsella rubella Carubv10006513m.g N 0.728
MLOC_18401 Hordeum vulgare MLOC_18401 N 0.728
Si025988m.g Setaria italica Si025988m.g N 0.728
LPERR01G37140 Leersia perrieri LPERR01G37140 N 0.728
MTR_8g027440 Medicago truncatula MTR_8g027440 N 0.728
OB01G51580 Oryza brachyantha OB01G51580 N 0.721
OLONG_010675 Oryza longistaminata OLONG_010675 N 0.713
TRAES3BF111600210CFD_g Triticum aestivum TRAES3BF111600210CFD_g N 0.713
Sb05g019540 Sorghum bicolor Sb05g019540 N 0.713
BRADI4G17410 Brachypodium distachyon BRADI4G17410 I 0.713
TRIUR3_02890 Triticum urartu TRIUR3_02890 N 0.713
MLOC_64596 Hordeum vulgare MLOC_64596 I 0.706
Ca_17636 Cicer arietinum Ca_17636 N 0.706