Cla005055 (Citrullus lanatus)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Cla005055 T021990_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla005055 B3 33 135

Links

Other B3 family TFs
Other Citrullus lanatus TFs

200 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.941
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.918
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.911
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.878
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.878
TCM_005014 Theobroma cacao TCM_005014 I 0.878
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.878
Pm028725 Prunus mume Pm028725 N 0.871
30068.m002615 Ricinus communis 30068.m002615 I 0.871
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.871
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.867
Pm024248 Prunus mume Pm024248 I 0.867
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.867
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.867
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.867
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.867
30076.m004471 Ricinus communis 30076.m004471 I 0.867
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.867
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.867
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.861
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.857
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.857
TCM_015590 Theobroma cacao TCM_015590 I 0.857
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.851
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.851
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.851
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.847
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.847
PK21157.1 Cannabis sativa PK21157.1 I 0.842
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.842
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.842
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.842
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.842
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.842
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.842
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.837
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.837
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.837
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.837
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.832
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.832
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.832
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.827
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.827
Si036864m.g Setaria italica Si036864m.g N 0.827
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.827
OB03G11610 Oryza brachyantha OB03G11610 N 0.827
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.827
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.827
Traes_2DL_2D1980C7B Triticum aestivum Traes_2DL_2D1980C7B N 0.825
OLONG_022770 Oryza longistaminata OLONG_022770 N 0.825
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.822
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.822
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.822
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.822
OS10G0537100 Oryza sativa OS10G0537100 N 0.816
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.816
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.816
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.816
NGA1 Arabidopsis thaliana AT2G46870 N 0.816
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.816
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.816
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.816
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.816
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.816
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.816
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.816
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.816
OBART10G17010 Oryza barthii OBART10G17010 N 0.816
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.816
NGA2 Arabidopsis thaliana AT3G61970 N 0.812
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.812
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.812
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.812
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.812
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I 0.812
Ca_01368 Cicer arietinum Ca_01368 I 0.806
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.806
Bostr.5325s0023 Boechera stricta Bostr.5325s0023 N 0.806
Carubv10009540m.g Capsella rubella Carubv10009540m.g N 0.806
Cagra.1968s0048 Capsella grandiflora Cagra.1968s0048 N 0.806
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.806
OS04G0581400 Oryza sativa OS04G0581400 I 0.806
Bo8g097490 Brassica oleracea Bo8g097490 N 0.806
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.806
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.806
NGA3 Arabidopsis lyrata fgenesh2_kg.1__134__AT1G01030.1 N 0.806
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.806
Bo4g197410 Brassica oleracea Bo4g197410 I 0.806
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.806
Bra007646 Brassica rapa Bra007646 N 0.806
NGA3 Arabidopsis thaliana AT1G01030 N 0.806
Thhalv10008068m.g Eutrema salsugineum Thhalv10008068m.g N 0.806
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.806
OBART04G22880 Oryza barthii OBART04G22880 I 0.806
Bo3g001110 Brassica oleracea Bo3g001110 N 0.806
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.802
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.802
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.802
OBART03G01650 Oryza barthii OBART03G01650 N 0.802
Bra003482 Brassica rapa Bra003482 N 0.802
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I 0.802
PK11025.1 Cannabis sativa PK11025.1 I 0.802
Cla006845 Citrullus lanatus Cla006845 I 0.802
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.802
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.802
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.802
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.802
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.802
OS03G0120900 Oryza sativa OS03G0120900 N 0.802
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.802
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.802
Bra040478 Brassica rapa Bra040478 I 0.800
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.796
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.796
Bra004501 Brassica rapa Bra004501 N 0.796
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.796
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.796
Bo6g079210 Brassica oleracea Bo6g079210 N 0.796
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.796
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.796
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.796
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.796
GSMUA_Achr5G20340_001 Musa acuminata GSMUA_Achr5G20340_001 N 0.792
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.792
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.792
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.792
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.792
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.792
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.790
Bra033294 Brassica rapa Bra033294 N 0.786
Bra000434 Brassica rapa Bra000434 N 0.786
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.786
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.784
mgf023769m Mimulus guttatus mgf023769m N 0.782
Si011823m.g Setaria italica Si011823m.g N 0.782
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.782
OB02G35380 Oryza brachyantha OB02G35380 I 0.782
Bo5g002790 Brassica oleracea Bo5g002790 N 0.782
Bo4g099000 Brassica oleracea Bo4g099000 N 0.776
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.775
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.773
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.772
Bra030497 Brassica rapa Bra030497 N 0.772
MDP0000138163 Malus domestica MDP0000138163 N 0.772
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.772
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.772
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.772
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.771
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.768
Cla014858 Citrullus lanatus Cla014858 N 0.768
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N 0.765
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.762
Bo3g039420 Brassica oleracea Bo3g039420 N 0.762
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.762
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.762
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.762
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.762
Bo4g006900 Brassica oleracea Bo4g006900 N 0.762
OBART02G28100 Oryza barthii OBART02G28100 N 0.762
OS02G0683500 Oryza sativa OS02G0683500 N 0.762
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.762
Bra014415 Brassica rapa Bra014415 N 0.762
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.762
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.762
MDP0000288808 Malus domestica MDP0000288808 N 0.755
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.752
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.752
Si020241m.g Setaria italica Si020241m.g N 0.752
OB10G24100 Oryza brachyantha OB10G24100 N 0.744
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.737
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.737
MDP0000229742 Malus domestica MDP0000229742 N 0.735
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.735
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.735
mgf023686m Mimulus guttatus mgf023686m I 0.735
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.735
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.733
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.733
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.733
TRIUR3_29732 Triticum urartu TRIUR3_29732 N 0.724
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.723
Si039972m.g Setaria italica Si039972m.g N 0.723
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.723
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.723
GRMZM2G125095 Zea mays GRMZM2G125095 N 0.714
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.714
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.714
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.713
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.713
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.710
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.707
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.707
SELMODRAFT_59317 Selaginella moellendorffii SELMODRAFT_59317 N 0.706
PK04952.1 Cannabis sativa PK04952.1 I 0.704
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I 0.704
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.704
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.704
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.704
Eucgr.G02345 Eucalyptus grandis Eucgr.G02345 I 0.700