Cla009258 (Citrullus lanatus)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Cla009258 T021996_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF8
M01697_2.00 		Arabidopsis thaliana
NHTGTCGGN
NCCGACADN		 PBM
Weirauch et al.(2014)
pTH8661 		0.833 0.833
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla009258 B3 128 196

Links

Other B3 family TFs
Other Citrullus lanatus TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LjSGA_022975.2 Lotus japonicus LjSGA_022975.2 I 1.000
SapurV1A.4298s0010 Salix purpurea SapurV1A.4298s0010 I 0.945
OMERI04G24630 Oryza meridionalis OMERI04G24630 I 0.909
LjSGA_026543.1 Lotus japonicus LjSGA_026543.1 I 0.898
Aquca_002_01425 Aquilegia coerulea Aquca_002_01425 I 0.883
cassava35541.valid.m1 Manihot esculenta cassava35541.valid.m1 I 0.883
MTR_5g076270 Medicago truncatula MTR_5g076270 I 0.883
cassava30265.valid.m1 Manihot esculenta cassava30265.valid.m1 I 0.883
29769.m000463 Ricinus communis 29769.m000463 I 0.883
cassava30266.valid.m1 Manihot esculenta cassava30266.valid.m1 I 0.883
Lus10007386.g Linum usitatissimum Lus10007386.g I 0.883
Lus10010969.g Linum usitatissimum Lus10010969.g I 0.883
Lus10031354.g Linum usitatissimum Lus10031354.g I 0.883
Cla009963 Citrullus lanatus Cla009963 I 0.867
TCM_029410 Theobroma cacao TCM_029410 I 0.867
Pm010467 Prunus mume Pm010467 I 0.867
cassava29103.valid.m1 Manihot esculenta cassava29103.valid.m1 I 0.867
29599.m000177 Ricinus communis 29599.m000177 I 0.867
cassava2408.valid.m1 Manihot esculenta cassava2408.valid.m1 I 0.867
Cucsa.047990 Cucumis sativus Cucsa.047990 I 0.867
MDP0000268306 Malus domestica MDP0000268306 I 0.867
SapurV1A.0030s0180 Salix purpurea SapurV1A.0030s0180 I 0.867
PK26077.1 Cannabis sativa PK26077.1 I 0.867
Gorai.009G152700 Gossypium raimondii Gorai.009G152700 I 0.867
gene30394-v1.0-hybrid Fragaria vesca gene30394-v1.0-hybrid I 0.867
cassava32201.m1 Manihot esculenta cassava32201.m1 I 0.867
TCM_017488 Theobroma cacao TCM_017488 I 0.867
cassava29104.valid.m1 Manihot esculenta cassava29104.valid.m1 I 0.867
ARF6 Vitis vinifera VIT_10s0003g04100 I 0.867
PRUPE_ppa001179mg Prunus persica PRUPE_ppa001179mg I 0.867
Cucsa.173470 Cucumis sativus Cucsa.173470 I 0.864
ORUFI06G26570 Oryza rufipogon ORUFI06G26570 I 0.860
SapurV1A.0355s0030 Salix purpurea SapurV1A.0355s0030 I 0.850
GSMUA_Achr11G01610_001 Musa acuminata GSMUA_Achr11G01610_001 I 0.850
Cucsa.152170 Cucumis sativus Cucsa.152170 I 0.850
VIT_00s1203g00010 Vitis vinifera VIT_00s1203g00010 I 0.850
Cla019844 Citrullus lanatus Cla019844 I 0.850
evm.TU.supercontig_108.15 Carica papaya evm.TU.supercontig_108.15 I 0.841
Sb08g021460 Sorghum bicolor Sb08g021460 I 0.833
OB12G25550 Oryza brachyantha OB12G25550 I 0.833
Bra028110 Brassica rapa Bra028110 I 0.833
mgf005961m Mimulus guttatus mgf005961m I 0.833
PGSC0003DMG401018664 Solanum tuberosum PGSC0003DMG401018664 I 0.833
GSMUA_Achr11G25770_001 Musa acuminata GSMUA_Achr11G25770_001 I 0.833
Bo4g136370 Brassica oleracea Bo4g136370 I 0.833
GRMZM2G081158 Zea mays GRMZM2G081158 I 0.833
VIT_04s0079g00160 Vitis vinifera VIT_04s0079g00160 I 0.828
Traes_2BL_889C1F272 Triticum aestivum Traes_2BL_889C1F272 I 0.823
PRUPE_ppa024354mg Prunus persica PRUPE_ppa024354mg I 0.820
Solyc12g006350.1 Solanum lycopersicum Solyc12g006350.1 I 0.811
SapurV1A.0289s0180 Salix purpurea SapurV1A.0289s0180 I 0.800
VIT_03s0167g00010 Vitis vinifera VIT_03s0167g00010 I 0.797
Cucsa.117420 Cucumis sativus Cucsa.117420 I 0.788
AMTR_s00007p00267580 Amborella trichopoda AMTR_s00007p00267580 I 0.783
SELMODRAFT_179736 Selaginella moellendorffii SELMODRAFT_179736 I 0.783
SELMODRAFT_451392 Selaginella moellendorffii SELMODRAFT_451392 I 0.783
PDK_20s1359912g002 Phoenix dactylifera PDK_20s1359912g002 I 0.781
Solyc12g006340.1 Solanum lycopersicum Solyc12g006340.1 I 0.768
PDK_20s1375001g001 Phoenix dactylifera PDK_20s1375001g001 I 0.767
MLOC_14584 Hordeum vulgare MLOC_14584 I 0.767
POPTR_0006s14070 Populus trichocarpa POPTR_0006s14070 I 0.767
Traes_7BS_F44A273F8 Triticum aestivum Traes_7BS_F44A273F8 I 0.767
Traes_7AS_582E3076D Triticum aestivum Traes_7AS_582E3076D I 0.767
Traes_7DS_1948388F8 Triticum aestivum Traes_7DS_1948388F8 I 0.767
Sb04g003240 Sorghum bicolor Sb04g003240 I 0.767
BRADI1G46602 Brachypodium distachyon BRADI1G46602 I 0.767
29739.m003713 Ricinus communis 29739.m003713 I 0.767
GRMZM2G102845 Zea mays GRMZM2G102845 I 0.750
GSMUA_Achr6G19850_001 Musa acuminata GSMUA_Achr6G19850_001 I 0.750
Bo6g099440 Brassica oleracea Bo6g099440 I 0.750
evm.TU.supercontig_115.30 Carica papaya evm.TU.supercontig_115.30 I 0.750
orange1.1g002390m.g Citrus sinensis orange1.1g002390m.g I 0.750
Bra004125 Brassica rapa Bra004125 I 0.750
Gorai.010G091300 Gossypium raimondii Gorai.010G091300 I 0.750
MTR_4g124900 Medicago truncatula MTR_4g124900 I 0.750
Pm027119 Prunus mume Pm027119 I 0.750
VIT_11s0016g00640 Vitis vinifera VIT_11s0016g00640 I 0.750
OB06G15720 Oryza brachyantha OB06G15720 I 0.750
PRUPE_ppa000708mg Prunus persica PRUPE_ppa000708mg I 0.750
Si013155m.g Setaria italica Si013155m.g I 0.750
Ciclev10014200m.g Citrus clementina Ciclev10014200m.g I 0.750
MTR_2g043250 Medicago truncatula MTR_2g043250 I 0.733
TRIUR3_22410 Triticum urartu TRIUR3_22410 I 0.725
Solyc04g081240.2 Solanum lycopersicum Solyc04g081240.2 I 0.717
PGSC0003DMG400003771 Solanum tuberosum PGSC0003DMG400003771 I 0.717
Lus10024320.g Linum usitatissimum Lus10024320.g I 0.717
MLOC_55345 Hordeum vulgare MLOC_55345 I 0.717
Carubv10000065m.g Capsella rubella Carubv10000065m.g I 0.717
MDP0000143749 Malus domestica MDP0000143749 I 0.717
TRIUR3_26420 Triticum urartu TRIUR3_26420 I 0.716
F775_00614 Aegilops tauschii F775_00614 I 0.714
Pavir.Gb00274 Panicum virgatum Pavir.Gb00274 I 0.710
Traes_2AL_98457FFEE Triticum aestivum Traes_2AL_98457FFEE I 0.705
Cla021128 Citrullus lanatus Cla021128 I 0.700
Pavir.Eb02716 Panicum virgatum Pavir.Eb02716 I 0.700
evm.TU.supercontig_26.25 Carica papaya evm.TU.supercontig_26.25 I 0.700
MTR_1g024025 Medicago truncatula MTR_1g024025 I 0.700