Cla014858 (Citrullus lanatus)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Cla014858 T022009_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla014858 B3 27 131

Links

Other B3 family TFs
Other Citrullus lanatus TFs

258 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30032.m000462 Ricinus communis 30032.m000462 N 0.737
30068.m002615 Ricinus communis 30068.m002615 I 0.808
30076.m004471 Ricinus communis 30076.m004471 I 0.869
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.727
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.737
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.818
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.737
NGA3 Arabidopsis thaliana AT1G01030 N 0.798
ARF31 Arabidopsis thaliana AT2G36080 N 0.727
NGA1 Arabidopsis thaliana AT2G46870 N 0.848
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.737
NGA2 Arabidopsis thaliana AT3G61970 N 0.798
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.768
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.828
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.859
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.828
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.747
Bo01079s020 Brassica oleracea Bo01079s020 N 0.717
Bo3g001110 Brassica oleracea Bo3g001110 N 0.778
Bo3g003800 Brassica oleracea Bo3g003800 N 0.707
Bo3g039420 Brassica oleracea Bo3g039420 N 0.859
Bo3g064320 Brassica oleracea Bo3g064320 N 0.717
Bo4g006900 Brassica oleracea Bo4g006900 N 0.828
Bo4g035110 Brassica oleracea Bo4g035110 N 0.717
Bo4g099000 Brassica oleracea Bo4g099000 N 0.798
Bo4g197410 Brassica oleracea Bo4g197410 I 0.838
Bo5g002790 Brassica oleracea Bo5g002790 N 0.788
Bo5g136360 Brassica oleracea Bo5g136360 N 0.717
Bo6g079210 Brassica oleracea Bo6g079210 N 0.828
Bo8g097490 Brassica oleracea Bo8g097490 N 0.808
Bo9g176470 Brassica oleracea Bo9g176470 N 0.737
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.758
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.808
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.737
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.727
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.859
Bostr.5325s0023 Boechera stricta Bostr.5325s0023 N 0.798
Bra000434 Brassica rapa Bra000434 N 0.828
Bra001411 Brassica rapa Bra001411 N 0.717
Bra003482 Brassica rapa Bra003482 N 0.792
Bra004501 Brassica rapa Bra004501 N 0.838
Bra005301 Brassica rapa Bra005301 N 0.717
Bra005886 Brassica rapa Bra005886 N 0.707
Bra007646 Brassica rapa Bra007646 N 0.808
Bra014415 Brassica rapa Bra014415 N 0.808
Bra017262 Brassica rapa Bra017262 N 0.727
Bra030497 Brassica rapa Bra030497 N 0.788
Bra033294 Brassica rapa Bra033294 N 0.768
Bra034828 Brassica rapa Bra034828 N 0.727
Bra040478 Brassica rapa Bra040478 I 0.859
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.788
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.828
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.848
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I 0.782
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.737
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.737
Cagra.1968s0048 Capsella grandiflora Cagra.1968s0048 N 0.798
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.758
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.758
Carubv10009540m.g Capsella rubella Carubv10009540m.g N 0.798
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.737
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.788
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.848
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.737
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.737
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.838
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.828
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.808
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.727
Ca_00826 Cicer arietinum Ca_00826 N 0.727
Ca_01368 Cicer arietinum Ca_01368 I 0.828
Ca_25633 Cicer arietinum Ca_25633 I 0.737
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.879
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.727
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.848
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.859
Cla005055 Citrullus lanatus Cla005055 N 0.768
Cla006845 Citrullus lanatus Cla006845 I 0.798
Cla017937 Citrullus lanatus Cla017937 I 0.727
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.970
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.808
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.717
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.798
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.707
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.808
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.859
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.727
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.859
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.869
F775_04153 Aegilops tauschii F775_04153 N 0.727
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.848
NGA3 Arabidopsis lyrata fgenesh2_kg.1__134__AT1G01030.1 N 0.798
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.848
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.808
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.768
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.848
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.717
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.848
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.778
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.707
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.828
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.848
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.747
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.832
GLYMA19G38340 Glycine max GLYMA19G38340 N 0.707
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.838
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.859
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.707
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.859
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.820
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N 0.703
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.828
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.798
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.828
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.737
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.838
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.798
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.798
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.838
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.828
GRMZM2G125095 Zea mays GRMZM2G125095 N 0.707
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.737
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.737
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.788
GSMUA_Achr5G20340_001 Musa acuminata GSMUA_Achr5G20340_001 N 0.778
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.717
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.727
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.869
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.818
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.859
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.838
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.768
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.707
Lus10034276.g Linum usitatissimum Lus10034276.g I 0.707
MDP0000138163 Malus domestica MDP0000138163 N 0.758
MDP0000288808 Malus domestica MDP0000288808 N 0.768
mgf019085m Mimulus guttatus mgf019085m N 0.747
mgf023686m Mimulus guttatus mgf023686m I 0.717
mgf023769m Mimulus guttatus mgf023769m N 0.828
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.808
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.737
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.737
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.737
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.828
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.859
OB02G35380 Oryza brachyantha OB02G35380 I 0.818
OB03G11610 Oryza brachyantha OB03G11610 N 0.848
OB10G24100 Oryza brachyantha OB10G24100 N 0.731
OB12G13420 Oryza brachyantha OB12G13420 N 0.717
OBART02G28100 Oryza barthii OBART02G28100 N 0.828
OBART03G01650 Oryza barthii OBART03G01650 N 0.859
OBART04G22880 Oryza barthii OBART04G22880 I 0.828
OBART10G17010 Oryza barthii OBART10G17010 N 0.747
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.828
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.859
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.828
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.747
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.722
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.828
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.859
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.747
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.717
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.859
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.828
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.747
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.828
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.828
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.859
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.747
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.703
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.848
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.859
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.727
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.828
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.859
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.828
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.747
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.828
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I 0.768
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.747
OS02G0683500 Oryza sativa OS02G0683500 N 0.828
OS03G0120900 Oryza sativa OS03G0120900 N 0.859
OS04G0581400 Oryza sativa OS04G0581400 I 0.828
OS10G0537100 Oryza sativa OS10G0537100 N 0.747
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.798
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.747
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.707
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.707
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.838
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.838
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.838
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.747
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.768
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.733
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.838
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.808
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.808
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.747
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.859
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.717
PK04952.1 Cannabis sativa PK04952.1 I 0.727
PK11025.1 Cannabis sativa PK11025.1 I 0.861
PK21157.1 Cannabis sativa PK21157.1 I 0.798
Pm024248 Prunus mume Pm024248 I 0.859
Pm028725 Prunus mume Pm028725 N 0.778
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.838
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.859
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.707
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.848
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.859
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.727
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.778
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.859
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.869
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.859
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.838
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.727
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.707
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.727
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.755
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.848
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.798
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.838
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.737
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.727
Si011823m.g Setaria italica Si011823m.g N 0.838
Si020241m.g Setaria italica Si020241m.g N 0.747
Si027632m.g Setaria italica Si027632m.g N 0.707
Si036864m.g Setaria italica Si036864m.g N 0.848
Si039972m.g Setaria italica Si039972m.g N 0.747
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.808
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.798
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.838
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.758
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.717
TCM_005014 Theobroma cacao TCM_005014 I 0.869
TCM_015590 Theobroma cacao TCM_015590 I 0.869
TCM_022729 Theobroma cacao TCM_022729 N 0.727
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.848
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I 0.808
Thhalv10008068m.g Eutrema salsugineum Thhalv10008068m.g N 0.798
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.737
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.737
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.737
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.727
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.788
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.838
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.808
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.848
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N 0.808
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.808
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.808
TRIUR3_01515 Triticum urartu TRIUR3_01515 N 0.737
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.717
TRIUR3_29732 Triticum urartu TRIUR3_29732 N 0.758
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.848
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.768
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.818