CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29851.m002493
(
Ricinus communis
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
29851.m002493
T022176_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29851.m002493
B3
21
113
FYKLIVASILHDKKLRIPEKFVKKYRDELSCIATLTVPNGRIWVVELEKVNKKLWFCSGWHEFVEYYSIRVGYFLVFRYEGESNFRVCIFDLT
29851.m002493
B3
254
345
FRVILRPSYVYRGFLLHIPSSFAQRYLTTTGCMTLQVSEGKQWPVRCVCRNRGAKLSKGWTEFAWDNNLEEGDVCVFELINMNVLKVTIFRL
Links
Other
B3
family TFs
Other
Ricinus communis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0004s15410
Populus trichocarpa
POPTR_0004s15410
N
0.730
SapurV1A.0185s0330
Salix purpurea
SapurV1A.0185s0330
N
0.708
cassava20317.m1
Manihot esculenta
cassava20317.m1
N
0.708
SapurV1A.2089s0020
Salix purpurea
SapurV1A.2089s0020
N
0.703
SapurV1A.0979s0050
Salix purpurea
SapurV1A.0979s0050
N
0.703