29851.m002498 (Ricinus communis)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 29851.m002498 T022178_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
VRN1
M06704_2.00
Arabidopsis thaliana
WWWTTTTTTTTTTTTTTTTTTTTTTTKTN

NAMAAAAAAAAAAAAAAAAAAAAAAAWWW
Dap-seq
OMalley et al.(2016)
VRN1_col_a
0.709 0.709
VRN1
M06705_2.00
Arabidopsis thaliana
NWBNTTTTTTTTTTTTKKB

VMMAAAAAAAAAAAANVWN
Dap-seq
OMalley et al.(2016)
VRN1_colamp_a
0.709 0.709
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29851.m002498 B3 5 98
29851.m002498 B3 221 315

Links

Other B3 family TFs
Other Ricinus communis TFs

Invalid Input OrderBy

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action