30131.m006860 (Ricinus communis)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 30131.m006860 T022201_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FUS3
M06706_2.00 		Arabidopsis thaliana
WNHWTGCATGYDHDW
WHDHRCATGCAWDNW		 Dap-seq
OMalley et al.(2016)
FUS3_col_a 		0.848 0.848
FUS3
M09773_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FUS3_Q2 		0.848 0.848
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30131.m006860 B3 132 234

Links

Other B3 family TFs
Other Ricinus communis TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava11393.m1 Manihot esculenta cassava11393.m1 I 0.948
orange1.1g041864m.g Citrus sinensis orange1.1g041864m.g I 0.929
TCM_017321 Theobroma cacao TCM_017321 I 0.919
Gorai.001G273500 Gossypium raimondii Gorai.001G273500 I 0.908
Ciclev10016085m.g Citrus clementina Ciclev10016085m.g I 0.899
Pm016099 Prunus mume Pm016099 I 0.899
PRUPE_ppa021307mg Prunus persica PRUPE_ppa021307mg I 0.898
POPTR_0017s08820 Populus trichocarpa POPTR_0017s08820 I 0.888
MTR_7g083700 Medicago truncatula MTR_7g083700 I 0.887
cassava14836.m1 Manihot esculenta cassava14836.m1 I 0.880
evm.TU.supercontig_70.84 Carica papaya evm.TU.supercontig_70.84 I 0.875
Ca_05976 Cicer arietinum Ca_05976 I 0.869
GLYMA19G27336 Glycine max GLYMA19G27336 I 0.867
POPTR_0001s32990 Populus trichocarpa POPTR_0001s32990 I 0.859
FUS3 Arabidopsis thaliana AT3G26790 D 0.857
Bostr.0556s0351 Boechera stricta Bostr.0556s0351 I 0.857
GLYMA16G05480 Glycine max GLYMA16G05480 I 0.857
LjSGA_037319.1 Lotus japonicus LjSGA_037319.1 I 0.853
Cla009252 Citrullus lanatus Cla009252 I 0.838
FUS3 Arabidopsis lyrata fgenesh2_kg.5__447__AT3G26790.1 I 0.838
Bra032953 Brassica rapa Bra032953 I 0.838
Carubv10019353m.g Capsella rubella Carubv10019353m.g I 0.838
Cagra.1841s0002 Capsella grandiflora Cagra.1841s0002 I 0.838
Bo00285s530 Brassica oleracea Bo00285s530 I 0.838
Thhalv10005481m.g Eutrema salsugineum Thhalv10005481m.g I 0.837
MDP0000268649 Malus domestica MDP0000268649 I 0.836
Lus10012572.g Linum usitatissimum Lus10012572.g I 0.828
Lus10041521.g Linum usitatissimum Lus10041521.g I 0.816
FUS3 Vitis vinifera VIT_14s0068g01290 I 0.758
Bo7g083910 Brassica oleracea Bo7g083910 I 0.737
SapurV1A.1101s0020 Salix purpurea SapurV1A.1101s0020 N 0.709