cassava19218.valid.m1 (Manihot esculenta)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 cassava19218.valid.m1 T022237_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava19218.valid.m1 B3 94 198

Links

Other B3 family TFs
Other Manihot esculenta TFs

270 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30032.m000462 Ricinus communis 30032.m000462 N 0.921
30068.m002615 Ricinus communis 30068.m002615 I 0.713
30076.m004471 Ricinus communis 30076.m004471 I 0.743
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.733
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.723
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.851
ARF31 Arabidopsis thaliana AT2G36080 N 0.842
NGA1 Arabidopsis thaliana AT2G46870 N 0.703
AT3G11580 Arabidopsis thaliana AT3G11580 N 0.822
AT5G06250 Arabidopsis thaliana AT5G06250 N 0.832
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.703
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.752
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.743
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.733
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.842
BGIOSGA036599 Oryza indica BGIOSGA036599 N 0.792
Bo01079s020 Brassica oleracea Bo01079s020 N 0.851
Bo3g003800 Brassica oleracea Bo3g003800 N 0.812
Bo3g039420 Brassica oleracea Bo3g039420 N 0.733
Bo3g064320 Brassica oleracea Bo3g064320 N 0.812
Bo4g035110 Brassica oleracea Bo4g035110 N 0.842
Bo4g197410 Brassica oleracea Bo4g197410 I 0.713
Bo5g136360 Brassica oleracea Bo5g136360 N 0.812
Bo6g079210 Brassica oleracea Bo6g079210 N 0.713
Bo9g176470 Brassica oleracea Bo9g176470 N 0.812
Bostr.13129s0349 Boechera stricta Bostr.13129s0349 N 0.812
Bostr.19424s1090 Boechera stricta Bostr.19424s1090 N 0.822
Bostr.23794s0488 Boechera stricta Bostr.23794s0488 N 0.842
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.713
Bra000434 Brassica rapa Bra000434 N 0.713
Bra001411 Brassica rapa Bra001411 N 0.812
Bra003482 Brassica rapa Bra003482 N 0.703
Bra005301 Brassica rapa Bra005301 N 0.842
Bra005886 Brassica rapa Bra005886 N 0.812
Bra017262 Brassica rapa Bra017262 N 0.851
Bra034828 Brassica rapa Bra034828 N 0.812
Bra040478 Brassica rapa Bra040478 I 0.723
Bra041023 Brassica rapa Bra041023 N 0.772
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.723
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.832
BRADI4G42167 Brachypodium distachyon BRADI4G42167 N 0.792
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.743
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.703
Cagra.0993s0119 Capsella grandiflora Cagra.0993s0119 N 0.842
Cagra.1655s0012 Capsella grandiflora Cagra.1655s0012 N 0.822
Cagra.2117s0038 Capsella grandiflora Cagra.2117s0038 I 0.822
Carubv10001689m.g Capsella rubella Carubv10001689m.g I 0.822
Carubv10014376m.g Capsella rubella Carubv10014376m.g N 0.822
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.703
Carubv10023925m.g Capsella rubella Carubv10023925m.g N 0.842
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.723
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.733
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.703
cassava3990.m1 Manihot esculenta cassava3990.m1 N 0.861
Ca_00826 Cicer arietinum Ca_00826 N 0.802
Ca_01368 Cicer arietinum Ca_01368 I 0.713
Ca_25633 Cicer arietinum Ca_25633 I 0.851
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.733
Ciclev10012008m.g Citrus clementina Ciclev10012008m.g I 0.881
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.743
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.723
Cla006845 Citrullus lanatus Cla006845 I 0.723
Cla014858 Citrullus lanatus Cla014858 N 0.737
Cla017937 Citrullus lanatus Cla017937 I 0.891
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.747
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.881
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.723
Eucgr.A02625 Eucalyptus grandis Eucgr.A02625 N 0.792
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.723
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.733
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.891
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.733
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.733
F775_02500 Aegilops tauschii F775_02500 N 0.812
F775_31255 Aegilops tauschii F775_31255 N 0.723
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.703
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.703
fgenesh2_kg.6__566__AT5G06250.2 Arabidopsis lyrata fgenesh2_kg.6__566__AT5G06250.2 N 0.832
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.723
gene15627-v1.0-hybrid Fragaria vesca gene15627-v1.0-hybrid I 0.871
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.713
GLYMA02G36090 Glycine max GLYMA02G36090 I 0.861
GLYMA03G35700 Glycine max GLYMA03G35700 N 0.792
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.723
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.723
GLYMA10G08871 Glycine max GLYMA10G08871 I 0.871
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.723
GLYMA19G38340 Glycine max GLYMA19G38340 N 0.792
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.733
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.733
Gorai.002G237900 Gossypium raimondii Gorai.002G237900 I 0.842
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.713
Gorai.006G152400 Gossypium raimondii Gorai.006G152400 N 0.861
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.723
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.703
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.723
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.921
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.743
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.713
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.743
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.723
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.733
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.727
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.760
GRMZM5G805685 Zea mays GRMZM5G805685 N 0.733
GSMUA_Achr3G19210_001 Musa acuminata GSMUA_Achr3G19210_001 N 0.762
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.792
GSMUA_Achr6G35600_001 Musa acuminata GSMUA_Achr6G35600_001 N 0.802
GSMUA_Achr9G02600_001 Musa acuminata GSMUA_Achr9G02600_001 I 0.723
LjSGA_011266.1 Lotus japonicus LjSGA_011266.1 N 0.792
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.743
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.703
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.743
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.743
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.723
LPERR11G03050 Leersia perrieri LPERR11G03050 N 0.733
LPERR12G03290 Leersia perrieri LPERR12G03290 N 0.782
Lus10004226.g Linum usitatissimum Lus10004226.g N 0.743
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.851
Lus10034276.g Linum usitatissimum Lus10034276.g I 0.703
MDP0000138163 Malus domestica MDP0000138163 N 0.723
MDP0000229742 Malus domestica MDP0000229742 N 0.812
mgf018965m Mimulus guttatus mgf018965m N 0.782
mgf019085m Mimulus guttatus mgf019085m N 0.832
mgf023769m Mimulus guttatus mgf023769m N 0.703
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.812
MLOC_44012 Hordeum vulgare MLOC_44012 I 0.704
MLOC_56530 Hordeum vulgare MLOC_56530 N 0.812
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.713
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.703
MTR_1g058350 Medicago truncatula MTR_1g058350 N 0.832
MTR_7g105370 Medicago truncatula MTR_7g105370 N 0.812
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.713
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.752
OB02G35380 Oryza brachyantha OB02G35380 I 0.713
OB03G11610 Oryza brachyantha OB03G11610 N 0.752
OB10G24100 Oryza brachyantha OB10G24100 N 0.718
OB11G12920 Oryza brachyantha OB11G12920 N 0.832
OB12G13420 Oryza brachyantha OB12G13420 N 0.851
OBART02G28100 Oryza barthii OBART02G28100 N 0.703
OBART03G01650 Oryza barthii OBART03G01650 N 0.752
OBART04G22880 Oryza barthii OBART04G22880 I 0.743
OBART10G17010 Oryza barthii OBART10G17010 N 0.733
OBART11G03590 Oryza barthii OBART11G03590 N 0.842
OBART12G03490 Oryza barthii OBART12G03490 N 0.792
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.703
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.752
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.743
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.733
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.842
OGLUM12G04180 Oryza glumaepatula OGLUM12G04180 N 0.792
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.842
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.703
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.752
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.723
OMERI11G03310 Oryza meridionalis OMERI11G03310 N 0.851
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.861
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.752
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.743
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.842
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.733
ONIVA12G03130 Oryza nivara ONIVA12G03130 N 0.792
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.703
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.703
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.752
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.733
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.842
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.851
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.743
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.723
orange1.1g019261m.g Citrus sinensis orange1.1g019261m.g I 0.881
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.703
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.752
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.743
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.733
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.842
ORGLA12G0033700 Oryza glaberrima ORGLA12G0033700 N 0.792
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.703
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.733
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.842
ORUFI12G03970 Oryza rufipogon ORUFI12G03970 N 0.792
OS02G0683500 Oryza sativa OS02G0683500 N 0.703
OS03G0120900 Oryza sativa OS03G0120900 N 0.752
OS04G0581400 Oryza sativa OS04G0581400 I 0.743
OS10G0537100 Oryza sativa OS10G0537100 N 0.733
OS11G0156000 Oryza sativa OS11G0156000 N 0.842
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.713
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.733
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.822
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.832
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.743
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N 0.812
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.822
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.733
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.733
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.713
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.726
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.713
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.743
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.723
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.723
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.822
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.733
PGSC0003DMG400028159 Solanum tuberosum PGSC0003DMG400028159 N 0.832
PK04952.1 Cannabis sativa PK04952.1 I 0.871
PK11025.1 Cannabis sativa PK11025.1 I 0.752
PK21157.1 Cannabis sativa PK21157.1 I 0.723
Pm024248 Prunus mume Pm024248 I 0.733
Pm028725 Prunus mume Pm028725 N 0.713
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.723
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.733
POPTR_0006s22460 Populus trichocarpa POPTR_0006s22460 N 0.921
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.723
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.723
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.931
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.703
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.733
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.869
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.733
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.723
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.743
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.911
SapurV1A.1211s0020 Salix purpurea SapurV1A.1211s0020 N 0.911
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.911
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.724
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.743
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.713
Sb05g003450 Sorghum bicolor Sb05g003450 N 0.842
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.743
Sb08g003550 Sorghum bicolor Sb08g003550 N 0.752
scaffold_301330.1 Arabidopsis lyrata scaffold_301330.1 N 0.822
scaffold_402221.1 Arabidopsis lyrata scaffold_402221.1 N 0.832
Si010849m.g Setaria italica Si010849m.g N 0.743
Si011823m.g Setaria italica Si011823m.g N 0.743
Si020241m.g Setaria italica Si020241m.g N 0.733
Si027632m.g Setaria italica Si027632m.g N 0.832
Si036864m.g Setaria italica Si036864m.g N 0.743
Si039972m.g Setaria italica Si039972m.g N 0.713
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.733
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.733
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.723
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.832
Solyc10g083210.1 Solanum lycopersicum Solyc10g083210.1 N 0.832
TCM_005014 Theobroma cacao TCM_005014 I 0.743
TCM_015590 Theobroma cacao TCM_015590 I 0.723
TCM_022729 Theobroma cacao TCM_022729 N 0.899
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.713
Thhalv10015675m.g Eutrema salsugineum Thhalv10015675m.g I 0.822
Thhalv10017156m.g Eutrema salsugineum Thhalv10017156m.g N 0.842
Thhalv10021305m.g Eutrema salsugineum Thhalv10021305m.g N 0.822
Traes_2AL_25382F498 Triticum aestivum Traes_2AL_25382F498 N 0.727
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.775
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.743
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.798
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.788
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.821
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.812
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.743
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.812
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.762
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N 0.703
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.812
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.802
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.802
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.713
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.713
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.829
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.733
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.851
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.733