cassava25238.valid.m1 (Manihot esculenta)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 cassava25238.valid.m1 T022254_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava25238.valid.m1 B3 327 428

Links

Other B3 family TFs
Other Manihot esculenta TFs

183 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29915.m000469 Ricinus communis 29915.m000469 N 0.990
29917.m001969 Ricinus communis 29917.m001969 N 0.848
29976.m000497 Ricinus communis 29976.m000497 N 0.879
AMTR_s00003p00266720 Amborella trichopoda AMTR_s00003p00266720 N 0.929
Aquca_008_00005 Aquilegia coerulea Aquca_008_00005 N 0.818
Aquca_045_00208 Aquilegia coerulea Aquca_045_00208 N 0.828
Aquca_063_00016 Aquilegia coerulea Aquca_063_00016 N 0.838
VAL1 Arabidopsis thaliana AT2G30470 N 0.848
VAL2 Arabidopsis thaliana AT4G32010 N 0.845
BGIOSGA023709 Oryza indica BGIOSGA023709 N 0.899
BGIOSGA025947 Oryza indica BGIOSGA025947 N 0.889
Bo1g024250 Brassica oleracea Bo1g024250 N 0.768
Bo3g024640 Brassica oleracea Bo3g024640 N 0.869
Bo4g058460 Brassica oleracea Bo4g058460 N 0.859
Bo4g173060 Brassica oleracea Bo4g173060 N 0.879
Bo7g115560 Brassica oleracea Bo7g115560 N 0.929
Bo7g115570 Brassica oleracea Bo7g115570 N 0.929
Bostr.10689s0100 Boechera stricta Bostr.10689s0100 N 0.778
Bostr.24513s0191 Boechera stricta Bostr.24513s0191 N 0.878
Bostr.7867s1055 Boechera stricta Bostr.7867s1055 N 0.929
Bra013535 Brassica rapa Bra013535 N 0.768
Bra018313 Brassica rapa Bra018313 N 0.859
Bra021635 Brassica rapa Bra021635 N 0.879
Bra022801 Brassica rapa Bra022801 N 0.869
Bra023968 Brassica rapa Bra023968 N 0.929
BRADI1G17680 Brachypodium distachyon BRADI1G17680 N 0.899
BRADI1G24720 Brachypodium distachyon BRADI1G24720 N 0.869
Cagra.0567s0011 Capsella grandiflora Cagra.0567s0011 N 0.869
Cagra.12385s0007 Capsella grandiflora Cagra.12385s0007 N 0.845
Cagra.3519s0007 Capsella grandiflora Cagra.3519s0007 N 0.737
Carubv10004192m.g Capsella rubella Carubv10004192m.g N 0.747
Carubv10004194m.g Capsella rubella Carubv10004194m.g N 0.845
Carubv10022654m.g Capsella rubella Carubv10022654m.g N 0.878
cassava13133.valid.m1 Manihot esculenta cassava13133.valid.m1 N 0.879
cassava39646.m1 Manihot esculenta cassava39646.m1 N 0.879
cassava41301.m1 Manihot esculenta cassava41301.m1 N 0.879
Ca_00244 Cicer arietinum Ca_00244 N 0.771
Ca_08924 Cicer arietinum Ca_08924 N 0.879
Ca_15659 Cicer arietinum Ca_15659 N 0.778
Ca_23185 Cicer arietinum Ca_23185 N 0.949
Ciclev10000225m.g Citrus clementina Ciclev10000225m.g N 0.899
Ciclev10011039m.g Citrus clementina Ciclev10011039m.g N 0.990
Ciclev10014219m.g Citrus clementina Ciclev10014219m.g N 0.889
Cla008225 Citrullus lanatus Cla008225 N 0.899
Cla018330 Citrullus lanatus Cla018330 N 0.949
Cucsa.045980 Cucumis sativus Cucsa.045980 N 0.899
Cucsa.111990 Cucumis sativus Cucsa.111990 N 0.793
Cucsa.177010 Cucumis sativus Cucsa.177010 N 0.949
Eucgr.B04027 Eucalyptus grandis Eucgr.B04027 N 0.838
Eucgr.E03465 Eucalyptus grandis Eucgr.E03465 N 0.838
Eucgr.E03467 Eucalyptus grandis Eucgr.E03467 N 0.717
Eucgr.F02704 Eucalyptus grandis Eucgr.F02704 N 0.970
Eucgr.L01473 Eucalyptus grandis Eucgr.L01473 N 0.869
evm.TU.supercontig_0.91 Carica papaya evm.TU.supercontig_0.91 N 0.970
evm.TU.supercontig_2.296 Carica papaya evm.TU.supercontig_2.296 N 0.889
F775_30051 Aegilops tauschii F775_30051 N 0.740
F775_32613 Aegilops tauschii F775_32613 N 0.899
gene13877-v1.0-hybrid Fragaria vesca gene13877-v1.0-hybrid N 0.970
gene28098-v1.0-hybrid Fragaria vesca gene28098-v1.0-hybrid N 0.909
gene30690-v1.0-hybrid Fragaria vesca gene30690-v1.0-hybrid N 0.847
GLYMA01G32810 Glycine max GLYMA01G32810 N 0.949
GLYMA02G40280 Glycine max GLYMA02G40280 N 0.838
GLYMA03G04330 Glycine max GLYMA03G04330 N 0.949
GLYMA11G31234 Glycine max GLYMA11G31234 N 0.899
GLYMA13G31970 Glycine max GLYMA13G31970 N 0.879
GLYMA14G38492 Glycine max GLYMA14G38492 N 0.848
GLYMA15G07350 Glycine max GLYMA15G07350 N 0.879
GLYMA18G05840 Glycine max GLYMA18G05840 N 0.899
Gorai.003G152700 Gossypium raimondii Gorai.003G152700 N 0.919
Gorai.005G004300 Gossypium raimondii Gorai.005G004300 N 0.960
Gorai.009G173100 Gossypium raimondii Gorai.009G173100 N 0.859
Gorai.011G022400 Gossypium raimondii Gorai.011G022400 N 0.879
Gorai.011G127500 Gossypium raimondii Gorai.011G127500 N 0.970
GRMZM2G008356 Zea mays GRMZM2G008356 N 0.879
GRMZM2G158162 Zea mays GRMZM2G158162 N 0.899
GRMZM2G172621 Zea mays GRMZM2G172621 N 0.899
GSMUA_Achr4G23790_001 Musa acuminata GSMUA_Achr4G23790_001 N 0.889
GSMUA_Achr5G27930_001 Musa acuminata GSMUA_Achr5G27930_001 N 0.889
GSMUA_Achr7G00120_001 Musa acuminata GSMUA_Achr7G00120_001 N 0.899
GSMUA_Achr8G01750_001 Musa acuminata GSMUA_Achr8G01750_001 N 0.909
GSMUA_Achr8G03800_001 Musa acuminata GSMUA_Achr8G03800_001 N 0.909
LjSGA_009543.1 Lotus japonicus LjSGA_009543.1 N 0.828
LjSGA_029833.1 Lotus japonicus LjSGA_029833.1 N 0.778
LPERR07G16110 Leersia perrieri LPERR07G16110 N 0.889
LPERR07G23240 Leersia perrieri LPERR07G23240 N 0.899
Lus10018440.g Linum usitatissimum Lus10018440.g N 0.838
Lus10022741.g Linum usitatissimum Lus10022741.g N 0.929
Lus10025142.g Linum usitatissimum Lus10025142.g N 0.960
Lus10025226.g Linum usitatissimum Lus10025226.g N 0.980
MDP0000127640 Malus domestica MDP0000127640 N 0.909
MDP0000229344 Malus domestica MDP0000229344 N 0.899
MDP0000267885 Malus domestica MDP0000267885 N 0.909
MDP0000274788 Malus domestica MDP0000274788 N 0.707
mgf007363m Mimulus guttatus mgf007363m N 0.960
mgf007846m Mimulus guttatus mgf007846m N 0.808
mgf013365m Mimulus guttatus mgf013365m N 0.818
mgf024907m Mimulus guttatus mgf024907m N 0.818
MLOC_36861 Hordeum vulgare MLOC_36861 N 0.849
MLOC_4657 Hordeum vulgare MLOC_4657 N 0.879
MTR_2g011940 Medicago truncatula MTR_2g011940 N 0.869
MTR_3g467380 Medicago truncatula MTR_3g467380 N 0.859
MTR_4g028130 Medicago truncatula MTR_4g028130 N 0.949
MTR_5g075410 Medicago truncatula MTR_5g075410 N 0.753
OB07G31850 Oryza brachyantha OB07G31850 N 0.899
OBART07G18780 Oryza barthii OBART07G18780 N 0.889
OBART07G26400 Oryza barthii OBART07G26400 N 0.899
OGLUM07G18530 Oryza glumaepatula OGLUM07G18530 N 0.889
OGLUM07G26430 Oryza glumaepatula OGLUM07G26430 N 0.899
OLONG_008212 Oryza longistaminata OLONG_008212 N 0.899
OLONG_013183 Oryza longistaminata OLONG_013183 N 0.889
OMERI07G15550 Oryza meridionalis OMERI07G15550 N 0.889
OMERI07G23020 Oryza meridionalis OMERI07G23020 N 0.899
ONIVA07G17160 Oryza nivara ONIVA07G17160 N 0.889
ONIVA07G26110 Oryza nivara ONIVA07G26110 N 0.899
OPUNC07G17640 Oryza punctata OPUNC07G17640 N 0.889
OPUNC07G24850 Oryza punctata OPUNC07G24850 N 0.788
orange1.1g002489m.g Citrus sinensis orange1.1g002489m.g N 0.889
orange1.1g002708m.g Citrus sinensis orange1.1g002708m.g N 0.990
orange1.1g039386m.g Citrus sinensis orange1.1g039386m.g N 0.730
ORGLA07G0151800 Oryza glaberrima ORGLA07G0151800 N 0.889
ORGLA07G0207500 Oryza glaberrima ORGLA07G0207500 N 0.899
ORUFI07G19520 Oryza rufipogon ORUFI07G19520 N 0.889
ORUFI07G27410 Oryza rufipogon ORUFI07G27410 N 0.899
OS07G0563350 Oryza sativa OS07G0563350 N 0.877
OS07G0679700 Oryza sativa OS07G0679700 N 0.899
Pavir.Ba00225 Panicum virgatum Pavir.Ba00225 N 0.889
Pavir.Ba00654 Panicum virgatum Pavir.Ba00654 N 0.879
Pavir.Bb03074 Panicum virgatum Pavir.Bb03074 N 0.879
Pavir.Bb03754 Panicum virgatum Pavir.Bb03754 N 0.889
PDK_20s13009463g004 Phoenix dactylifera PDK_20s13009463g004 N 0.919
PDK_20s13009466g004 Phoenix dactylifera PDK_20s13009466g004 N 0.899
PDK_20s1314471g001 Phoenix dactylifera PDK_20s1314471g001 N 0.783
PDK_20s1455001g004 Phoenix dactylifera PDK_20s1455001g004 N 0.707
PK04158.1 Cannabis sativa PK04158.1 N 0.899
PK09020.1 Cannabis sativa PK09020.1 N 0.908
PK13763.1 Cannabis sativa PK13763.1 N 0.960
Pm000247 Prunus mume Pm000247 N 0.909
Pm003031 Prunus mume Pm003031 N 0.970
Pm009906 Prunus mume Pm009906 N 0.909
POPTR_0004s03530 Populus trichocarpa POPTR_0004s03530 N 0.889
POPTR_0006s10880 Populus trichocarpa POPTR_0006s10880 N 0.980
POPTR_0011s04340 Populus trichocarpa POPTR_0011s04340 N 0.899
POPTR_0013s15330 Populus trichocarpa POPTR_0013s15330 N 0.848
POPTR_0016s14350 Populus trichocarpa POPTR_0016s14350 N 0.980
POPTR_0019s15070 Populus trichocarpa POPTR_0019s15070 N 0.859
PRUPE_ppa001220mg Prunus persica PRUPE_ppa001220mg N 0.909
PRUPE_ppa001229mg Prunus persica PRUPE_ppa001229mg N 0.909
PRUPE_ppa001234mg Prunus persica PRUPE_ppa001234mg N 0.970
SapurV1A.0028s0060 Salix purpurea SapurV1A.0028s0060 N 0.889
SapurV1A.0044s0150 Salix purpurea SapurV1A.0044s0150 N 0.909
SapurV1A.0065s0470 Salix purpurea SapurV1A.0065s0470 N 0.980
SapurV1A.0215s0260 Salix purpurea SapurV1A.0215s0260 N 0.848
SapurV1A.0914s0080 Salix purpurea SapurV1A.0914s0080 N 0.980
SapurV1A.1353s0040 Salix purpurea SapurV1A.1353s0040 N 0.838
Sb02g036430 Sorghum bicolor Sb02g036430 N 0.879
Sb02g043000 Sorghum bicolor Sb02g043000 N 0.899
HSI2 Arabidopsis lyrata scaffold_401535.1 N 0.859
HSL1 Arabidopsis lyrata scaffold_700997.1 N 0.845
SELMODRAFT_451626 Selaginella moellendorffii SELMODRAFT_451626 N 0.848
SELMODRAFT_451631 Selaginella moellendorffii SELMODRAFT_451631 N 0.848
SELMODRAFT_451634 Selaginella moellendorffii SELMODRAFT_451634 N 0.727
SELMODRAFT_451635 Selaginella moellendorffii SELMODRAFT_451635 N 0.727
Si028829m.g Setaria italica Si028829m.g N 0.879
Si028834m.g Setaria italica Si028834m.g N 0.889
Solyc02g079020.2 Solanum lycopersicum Solyc02g079020.2 N 0.889
Solyc06g082520.2 Solanum lycopersicum Solyc06g082520.2 N 0.889
Solyc10g075030.1 Solanum lycopersicum Solyc10g075030.1 N 0.980
TCM_019701 Theobroma cacao TCM_019701 N 0.960
TCM_029976 Theobroma cacao TCM_029976 N 0.869
TCM_042290 Theobroma cacao TCM_042290 N 0.929
Thhalv10016263m.g Eutrema salsugineum Thhalv10016263m.g N 0.859
Thhalv10024481m.g Eutrema salsugineum Thhalv10024481m.g N 0.929
Thhalv10024526m.g Eutrema salsugineum Thhalv10024526m.g N 0.768
Traes_2AS_C4FD8E351 Triticum aestivum Traes_2AS_C4FD8E351 N 0.879
Traes_2AS_F4CEC9849 Triticum aestivum Traes_2AS_F4CEC9849 N 0.899
Traes_2BS_5B00A8C50 Triticum aestivum Traes_2BS_5B00A8C50 N 0.899
Traes_2BS_A61094919 Triticum aestivum Traes_2BS_A61094919 N 0.879
Traes_2DS_3E4E3BEFC Triticum aestivum Traes_2DS_3E4E3BEFC N 0.879
Traes_2DS_B1C947D2B Triticum aestivum Traes_2DS_B1C947D2B N 0.899
TRIUR3_04238 Triticum urartu TRIUR3_04238 N 0.899
VAL3 Vitis vinifera VIT_00s0181g00260 N 0.889
VIT_06s0004g08100 Vitis vinifera VIT_06s0004g08100 N 0.869
HSL1 Vitis vinifera VIT_08s0058g01300 N 0.980