cassava34238.m1 (Manihot esculenta)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 cassava34238.m1 T022274_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava34238.m1 B3 560 663

Links

Other B3 family TFs
Other Manihot esculenta TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30204.m001803 Ricinus communis 30204.m001803 N 0.969
Gorai.001G184300 Gossypium raimondii Gorai.001G184300 N 0.969
TCM_003056 Theobroma cacao TCM_003056 N 0.948
POPTR_0002s25330 Populus trichocarpa POPTR_0002s25330 N 0.948
evm.TU.supercontig_8.187 Carica papaya evm.TU.supercontig_8.187 N 0.948
orange1.1g038867m.g Citrus sinensis orange1.1g038867m.g N 0.948
Ciclev10019039m.g Citrus clementina Ciclev10019039m.g N 0.948
Cagra.2774s0002 Capsella grandiflora Cagra.2774s0002 N 0.938
Carubv10016094m.g Capsella rubella Carubv10016094m.g N 0.938
Bostr.19424s0154 Boechera stricta Bostr.19424s0154 N 0.938
Thhalv10003110m.g Eutrema salsugineum Thhalv10003110m.g N 0.938
ABI3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3002399 N 0.938
ABI3 Arabidopsis thaliana AT3G24650 N 0.938
Lus10011888.g Linum usitatissimum Lus10011888.g N 0.938
Cucsa.078480 Cucumis sativus Cucsa.078480 N 0.938
Lus10022820.g Linum usitatissimum Lus10022820.g N 0.928
SapurV1A.0937s0080 Salix purpurea SapurV1A.0937s0080 N 0.928
Bra013248 Brassica rapa Bra013248 N 0.928
Bo3g083650 Brassica oleracea Bo3g083650 N 0.928
AMTR_s00049p00034730 Amborella trichopoda AMTR_s00049p00034730 N 0.918
GLYMA18G38490 Glycine max GLYMA18G38490 N 0.908
GLYMA08G47240 Glycine max GLYMA08G47240 N 0.908
MDP0000309680 Malus domestica MDP0000309680 N 0.907
ABI3 Vitis vinifera VIT_07s0005g05400 N 0.907
chr1.CM0147.220.nd Lotus japonicus chr1.CM0147.220.nd N 0.907
Aquca_108_00003 Aquilegia coerulea Aquca_108_00003 N 0.907
Pm020417 Prunus mume Pm020417 N 0.897
Ca_21518 Cicer arietinum Ca_21518 N 0.897
mgf023017m Mimulus guttatus mgf023017m N 0.897
PRUPE_ppa001608mg Prunus persica PRUPE_ppa001608mg N 0.897
MTR_7g059330 Medicago truncatula MTR_7g059330 N 0.897
GSMUA_AchrUn_randomG18520_001 Musa acuminata GSMUA_AchrUn_randomG18520_001 N 0.897
GSMUA_Achr7G23040_001 Musa acuminata GSMUA_Achr7G23040_001 N 0.897
PGSC0003DMG400020088 Solanum tuberosum PGSC0003DMG400020088 N 0.887
gene17562-v1.0-hybrid Fragaria vesca gene17562-v1.0-hybrid N 0.884
GRMZM2G133398 Zea mays GRMZM2G133398 N 0.876
cassava2971.m1 Manihot esculenta cassava2971.m1 N 0.876
Pavir.J03563 Panicum virgatum Pavir.J03563 N 0.876
Pavir.Ea03476 Panicum virgatum Pavir.Ea03476 N 0.876
Si000497m.g Setaria italica Si000497m.g N 0.876
PGSC0003DMG400020155 Solanum tuberosum PGSC0003DMG400020155 N 0.867
OB01G50120 Oryza brachyantha OB01G50120 N 0.867
Cla015213 Citrullus lanatus Cla015213 N 0.867
Solyc06g083600.1 Solanum lycopersicum Solyc06g083600.1 N 0.867
BRADI2G58390 Brachypodium distachyon BRADI2G58390 N 0.866
Sb03g043480 Sorghum bicolor Sb03g043480 N 0.866
LPERR01G35880 Leersia perrieri LPERR01G35880 N 0.857
BGIOSGA000276 Oryza indica BGIOSGA000276 N 0.857
ONIVA01G46510 Oryza nivara ONIVA01G46510 N 0.857
ORUFI01G44750 Oryza rufipogon ORUFI01G44750 N 0.857
ORGLA01G0353400 Oryza glaberrima ORGLA01G0353400 N 0.857
OGLUM01G45580 Oryza glumaepatula OGLUM01G45580 N 0.857
OBART01G41410 Oryza barthii OBART01G41410 N 0.857
Solyc06g083590.2 Solanum lycopersicum Solyc06g083590.2 N 0.835
F775_43744 Aegilops tauschii F775_43744 N 0.835
MLOC_69727 Hordeum vulgare MLOC_69727 N 0.835
TRAES3BF066400010CFD_g Triticum aestivum TRAES3BF066400010CFD_g N 0.835
Eucgr.H00815 Eucalyptus grandis Eucgr.H00815 N 0.819
VP1 Oryza sativa OS01G0911700 N 0.806
MDP0000166580 Malus domestica MDP0000166580 N 0.798
OMERI01G38380 Oryza meridionalis OMERI01G38380 N 0.792
OLONG_001180 Oryza longistaminata OLONG_001180 N 0.792
PDK_20s1318001g001 Phoenix dactylifera PDK_20s1318001g001 N 0.765