Cucsa.173470 (Cucumis sativus)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Cucsa.173470 T022361_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF8
M01697_2.00
Arabidopsis thaliana
NHTGTCGGN

NCCGACADN
PBM
Weirauch et al.(2014)
pTH8661
0.831 0.831
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.173470.1 B3 128 191

Links

Other B3 family TFs
Other Cucumis sativus TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
VIT_00s1203g00010 Vitis vinifera VIT_00s1203g00010 I 0.864
cassava2408.valid.m1 Manihot esculenta cassava2408.valid.m1 I 0.881
cassava29103.valid.m1 Manihot esculenta cassava29103.valid.m1 I 0.881
cassava29104.valid.m1 Manihot esculenta cassava29104.valid.m1 I 0.881
cassava30265.valid.m1 Manihot esculenta cassava30265.valid.m1 I 0.881
cassava30266.valid.m1 Manihot esculenta cassava30266.valid.m1 I 0.881
cassava32201.m1 Manihot esculenta cassava32201.m1 I 0.881
cassava35541.valid.m1 Manihot esculenta cassava35541.valid.m1 I 0.881
Cucsa.047990 Cucumis sativus Cucsa.047990 I 0.881
Cucsa.117420 Cucumis sativus Cucsa.117420 I 0.769
Cucsa.152170 Cucumis sativus Cucsa.152170 I 0.864
mgf005961m Mimulus guttatus mgf005961m I 0.847
mgf007038m Mimulus guttatus mgf007038m I 0.763
29769.m000463 Ricinus communis 29769.m000463 I 0.881
29739.m003713 Ricinus communis 29739.m003713 I 0.780
29599.m000177 Ricinus communis 29599.m000177 I 0.881
VIT_03s0167g00010 Vitis vinifera VIT_03s0167g00010 I 0.797
VIT_04s0079g00160 Vitis vinifera VIT_04s0079g00160 I 0.797
ARF6 Vitis vinifera VIT_10s0003g04100 I 0.881
VIT_11s0016g00640 Vitis vinifera VIT_11s0016g00640 I 0.763
Ca_05025 Cicer arietinum Ca_05025 I 0.831
Ca_15694 Cicer arietinum Ca_15694 I 0.881
Cla009258 Citrullus lanatus Cla009258 I 0.864
Cla009963 Citrullus lanatus Cla009963 I 0.881
Cla019844 Citrullus lanatus Cla019844 I 0.864
Cla021128 Citrullus lanatus Cla021128 I 0.712
Pm010467 Prunus mume Pm010467 I 0.881
Pm027119 Prunus mume Pm027119 I 0.797
mgf012918m Mimulus guttatus mgf012918m I 0.780
Aquca_002_01425 Aquilegia coerulea Aquca_002_01425 I 0.881
MDP0000268306 Malus domestica MDP0000268306 I 0.881
orange1.1g002390m.g Citrus sinensis orange1.1g002390m.g I 0.763
Pavir.Eb02716 Panicum virgatum Pavir.Eb02716 I 0.729
SapurV1A.0030s0180 Salix purpurea SapurV1A.0030s0180 I 0.881
SapurV1A.0147s0210 Salix purpurea SapurV1A.0147s0210 I 0.864
SapurV1A.0289s0180 Salix purpurea SapurV1A.0289s0180 I 0.814
SapurV1A.0355s0030 Salix purpurea SapurV1A.0355s0030 I 0.864
SapurV1A.4298s0010 Salix purpurea SapurV1A.4298s0010 I 0.909
PK26077.1 Cannabis sativa PK26077.1 I 0.881
LjSGA_022975.2 Lotus japonicus LjSGA_022975.2 I 0.962
LjSGA_026543.1 Lotus japonicus LjSGA_026543.1 I 0.881
PDK_20s1359912g002 Phoenix dactylifera PDK_20s1359912g002 I 0.750
MDP0000232417 Malus domestica MDP0000232417 I 0.864
MDP0000143749 Malus domestica MDP0000143749 I 0.729
Lus10031354.g Linum usitatissimum Lus10031354.g I 0.881
Carubv10000065m.g Capsella rubella Carubv10000065m.g I 0.763
Ciclev10014200m.g Citrus clementina Ciclev10014200m.g I 0.763
evm.TU.supercontig_108.15 Carica papaya evm.TU.supercontig_108.15 I 0.810
evm.TU.supercontig_115.30 Carica papaya evm.TU.supercontig_115.30 I 0.763
evm.TU.supercontig_26.25 Carica papaya evm.TU.supercontig_26.25 I 0.712
gene30394-v1.0-hybrid Fragaria vesca gene30394-v1.0-hybrid I 0.881
Gorai.008G097200 Gossypium raimondii Gorai.008G097200 I 0.797
Gorai.009G152700 Gossypium raimondii Gorai.009G152700 I 0.881
Gorai.010G091300 Gossypium raimondii Gorai.010G091300 I 0.797
Lus10007386.g Linum usitatissimum Lus10007386.g I 0.881
Lus10010969.g Linum usitatissimum Lus10010969.g I 0.881
Lus10024320.g Linum usitatissimum Lus10024320.g I 0.729
PDK_20s1375001g001 Phoenix dactylifera PDK_20s1375001g001 I 0.780
AMTR_s00007p00267580 Amborella trichopoda AMTR_s00007p00267580 I 0.797
GSMUA_Achr6G19850_001 Musa acuminata GSMUA_Achr6G19850_001 I 0.763
MLOC_14584 Hordeum vulgare MLOC_14584 I 0.780
MLOC_55345 Hordeum vulgare MLOC_55345 I 0.729
MLOC_64596 Hordeum vulgare MLOC_64596 I 0.712
MTR_1g024025 Medicago truncatula MTR_1g024025 I 0.712
MTR_2g043250 Medicago truncatula MTR_2g043250 I 0.780
MTR_4g124900 Medicago truncatula MTR_4g124900 I 0.797
MTR_5g076270 Medicago truncatula MTR_5g076270 I 0.881
OB01G35190 Oryza brachyantha OB01G35190 I 0.712
OB06G15720 Oryza brachyantha OB06G15720 I 0.814
OB12G25550 Oryza brachyantha OB12G25550 I 0.847
OMERI04G24630 Oryza meridionalis OMERI04G24630 I 0.891
GSMUA_Achr11G25770_001 Musa acuminata GSMUA_Achr11G25770_001 I 0.881
GSMUA_Achr11G01610_001 Musa acuminata GSMUA_Achr11G01610_001 I 0.847
GRMZM2G317900 Zea mays GRMZM2G317900 I 0.763
AMTR_s00092p00072950 Amborella trichopoda AMTR_s00092p00072950 I 0.864
BGIOSGA014158 Oryza indica BGIOSGA014158 I 0.729
Bo4g136370 Brassica oleracea Bo4g136370 I 0.831
Bo6g099440 Brassica oleracea Bo6g099440 I 0.797
Bra004125 Brassica rapa Bra004125 I 0.797
Bra028110 Brassica rapa Bra028110 I 0.831
BRADI1G46602 Brachypodium distachyon BRADI1G46602 I 0.831
F775_00614 Aegilops tauschii F775_00614 I 0.814
GRMZM2G034840 Zea mays GRMZM2G034840 I 0.729
GRMZM2G081158 Zea mays GRMZM2G081158 I 0.847
GRMZM2G086949 Zea mays GRMZM2G086949 I 0.729
GRMZM2G102845 Zea mays GRMZM2G102845 I 0.763
OPUNC04G11520 Oryza punctata OPUNC04G11520 I 0.712
ORUFI06G26570 Oryza rufipogon ORUFI06G26570 I 0.880
Solyc12g006340.1 Solanum lycopersicum Solyc12g006340.1 I 0.786
Solyc12g006350.1 Solanum lycopersicum Solyc12g006350.1 I 0.830
TCM_017488 Theobroma cacao TCM_017488 I 0.881
TCM_029410 Theobroma cacao TCM_029410 I 0.881
Traes_2AL_05ECC440C Triticum aestivum Traes_2AL_05ECC440C I 0.729
Traes_2AL_98457FFEE Triticum aestivum Traes_2AL_98457FFEE I 0.705
Traes_2BL_889C1F272 Triticum aestivum Traes_2BL_889C1F272 I 0.774
Traes_2BL_E322FD546 Triticum aestivum Traes_2BL_E322FD546 I 0.729
Traes_2DL_FBE64209C Triticum aestivum Traes_2DL_FBE64209C I 0.729
Traes_7AS_582E3076D Triticum aestivum Traes_7AS_582E3076D I 0.780
Traes_7BS_F44A273F8 Triticum aestivum Traes_7BS_F44A273F8 I 0.780
Traes_7DS_1948388F8 Triticum aestivum Traes_7DS_1948388F8 I 0.780
Solyc04g081240.2 Solanum lycopersicum Solyc04g081240.2 I 0.729
Solyc02g037530.2 Solanum lycopersicum Solyc02g037530.2 I 0.763
Si013155m.g Setaria italica Si013155m.g I 0.763
PGSC0003DMG400003771 Solanum tuberosum PGSC0003DMG400003771 I 0.729
PGSC0003DMG401018664 Solanum tuberosum PGSC0003DMG401018664 I 0.847
POPTR_0006s14070 Populus trichocarpa POPTR_0006s14070 I 0.780
POPTR_0017s01870 Populus trichocarpa POPTR_0017s01870 I 0.864
PRUPE_ppa000708mg Prunus persica PRUPE_ppa000708mg I 0.797
PRUPE_ppa001179mg Prunus persica PRUPE_ppa001179mg I 0.881
PRUPE_ppa024354mg Prunus persica PRUPE_ppa024354mg I 0.770
Sb04g003240 Sorghum bicolor Sb04g003240 I 0.780
Sb06g031900 Sorghum bicolor Sb06g031900 I 0.729
Sb08g021460 Sorghum bicolor Sb08g021460 I 0.847
SELMODRAFT_179736 Selaginella moellendorffii SELMODRAFT_179736 I 0.780
SELMODRAFT_451392 Selaginella moellendorffii SELMODRAFT_451392 I 0.780
TRIUR3_26420 Triticum urartu TRIUR3_26420 I 0.763