CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.183410
(
Cucumis sativus
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Cucsa.183410
T022363_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.183410.1
B3
128
229
FCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRL
Cucsa.183410.1
B3
583
627
KLEEMFDIEGELCGSLKKWQVVYTDDEDDMMLVGDDPWNEFCSMV
Cucsa.183410.2
B3
128
229
FCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRL
Cucsa.183410.2
B3
583
627
KLEEMFDIEGELCGSLKKWQVVYTDDEDDMMLVGDDPWNEFCSMV
Cucsa.183410.3
B3
128
229
FCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRL
Cucsa.183410.3
B3
580
624
KLEEMFDIEGELCGSLKKWQVVYTDDEDDMMLVGDDPWNEFCSMV
Links
Other
B3
family TFs
Other
Cucumis sativus
TFs
77 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla001927
Citrullus lanatus
Cla001927
N
0.985
Ciclev10000491m.g
Citrus clementina
Ciclev10000491m.g
N
0.963
Eucgr.G00076
Eucalyptus grandis
Eucgr.G00076
I
0.922
29609.m000587
Ricinus communis
29609.m000587
N
0.919
Lus10024455.g
Linum usitatissimum
Lus10024455.g
N
0.912
cassava11454.m1
Manihot esculenta
cassava11454.m1
N
0.904
cassava7098.valid.m1
Manihot esculenta
cassava7098.valid.m1
N
0.904
cassava11456.m1
Manihot esculenta
cassava11456.m1
N
0.904
cassava11453.m1
Manihot esculenta
cassava11453.m1
N
0.904
cassava7099.valid.m1
Manihot esculenta
cassava7099.valid.m1
N
0.904
PRUPE_ppa002394mg
Prunus persica
PRUPE_ppa002394mg
N
0.904
TCM_027113
Theobroma cacao
TCM_027113
I
0.904
cassava11455.m1
Manihot esculenta
cassava11455.m1
N
0.904
SapurV1A.0225s0120
Salix purpurea
SapurV1A.0225s0120
N
0.897
SapurV1A.0422s0040
Salix purpurea
SapurV1A.0422s0040
I
0.897
Lus10007440.g
Linum usitatissimum
Lus10007440.g
N
0.890
ARF1
Arabidopsis lyrata
fgenesh2_kg.2__468__AT1G59750.1
N
0.882
Cagra.0996s0001
Capsella grandiflora
Cagra.0996s0001
N
0.875
Carubv10022415m.g
Capsella rubella
Carubv10022415m.g
N
0.875
ARF1
Arabidopsis thaliana
AT1G59750
N
0.875
Bo1g090350
Brassica oleracea
Bo1g090350
N
0.875
Bra035427
Brassica rapa
Bra035427
N
0.875
GLYMA12G28550
Glycine max
GLYMA12G28550
N
0.875
GLYMA07G40270
Glycine max
GLYMA07G40270
N
0.875
OGLUM02G20880
Oryza glumaepatula
OGLUM02G20880
N
0.875
Gorai.011G091100
Gossypium raimondii
Gorai.011G091100
N
0.868
Solyc01g103050.2
Solanum lycopersicum
Solyc01g103050.2
N
0.868
PGSC0003DMG400020711
Solanum tuberosum
PGSC0003DMG400020711
I
0.868
Thhalv10023326m.g
Eutrema salsugineum
Thhalv10023326m.g
N
0.868
Sb04g022830
Sorghum bicolor
Sb04g022830
N
0.861
Bo4g083590
Brassica oleracea
Bo4g083590
N
0.853
POPTR_0003s00890
Populus trichocarpa
POPTR_0003s00890
N
0.848
Traes_2AL_89543BA1A
Triticum aestivum
Traes_2AL_89543BA1A
N
0.846
TRIUR3_33501
Triticum urartu
TRIUR3_33501
N
0.846
mgf006427m
Mimulus guttatus
mgf006427m
N
0.845
Traes_2DL_A86E54838
Triticum aestivum
Traes_2DL_A86E54838
N
0.833
ORGLA02G0176700
Oryza glaberrima
ORGLA02G0176700
N
0.831
ORUFI02G21640
Oryza rufipogon
ORUFI02G21640
N
0.831
OMERI02G20310
Oryza meridionalis
OMERI02G20310
N
0.831
OPUNC02G18520
Oryza punctata
OPUNC02G18520
N
0.831
OLONG_012362
Oryza longistaminata
OLONG_012362
N
0.831
OBART02G20600
Oryza barthii
OBART02G20600
N
0.831
BGIOSGA008429
Oryza indica
BGIOSGA008429
N
0.831
ARF7
Oryza sativa
OS02G0557200
N
0.831
ONIVA02G22590
Oryza nivara
ONIVA02G22590
N
0.831
VIT_18s0089g00910
Vitis vinifera
VIT_18s0089g00910
N
0.824
Bostr.10040s0256
Boechera stricta
Bostr.10040s0256
N
0.808
AMTR_s00021p00221770
Amborella trichopoda
AMTR_s00021p00221770
N
0.787
Cla015243
Citrullus lanatus
Cla015243
N
0.757
29742.m001397
Ricinus communis
29742.m001397
N
0.757
Cagra.1226s0063
Capsella grandiflora
Cagra.1226s0063
N
0.735
Carubv10006513m.g
Capsella rubella
Carubv10006513m.g
N
0.735
MTR_8g027440
Medicago truncatula
MTR_8g027440
N
0.735
GSMUA_Achr6G16450_001
Musa acuminata
GSMUA_Achr6G16450_001
N
0.728
ORUFI12G13110
Oryza rufipogon
ORUFI12G13110
N
0.728
MLOC_18401
Hordeum vulgare
MLOC_18401
N
0.721
Si025988m.g
Setaria italica
Si025988m.g
N
0.721
Ca_17636
Cicer arietinum
Ca_17636
N
0.713
MLOC_64596
Hordeum vulgare
MLOC_64596
I
0.713
OB01G51580
Oryza brachyantha
OB01G51580
N
0.713
PK12669.1
Cannabis sativa
PK12669.1
I
0.706
POPTR_0004s23770
Populus trichocarpa
POPTR_0004s23770
I
0.706
GSMUA_Achr2G19760_001
Musa acuminata
GSMUA_Achr2G19760_001
N
0.706
TRIUR3_02890
Triticum urartu
TRIUR3_02890
N
0.706
OLONG_010675
Oryza longistaminata
OLONG_010675
N
0.706
BRADI4G17410
Brachypodium distachyon
BRADI4G17410
I
0.706
TRAES3BF111600210CFD_g
Triticum aestivum
TRAES3BF111600210CFD_g
N
0.706
OGLUM12G13560
Oryza glumaepatula
OGLUM12G13560
N
0.702
OBART12G11990
Oryza barthii
OBART12G11990
N
0.702
BGIOSGA036199
Oryza indica
BGIOSGA036199
N
0.702
OMERI12G08550
Oryza meridionalis
OMERI12G08550
N
0.702
ARF24
Oryza sativa
OS12G0479400
N
0.702
ORGLA12G0109100
Oryza glaberrima
ORGLA12G0109100
N
0.702
OPUNC12G10620
Oryza punctata
OPUNC12G10620
N
0.702
ONIVA12G12070
Oryza nivara
ONIVA12G12070
N
0.702
OLONG_019549
Oryza longistaminata
OLONG_019549
N
0.702