estExt_Genewise1.C_2800001 (Physcomitrella patens)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 estExt_Genewise1.C_2800001 T022407_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF3
M00852_2.00
Arabidopsis thaliana
NKGTYBNN

NNVRACMN
PBM
Franco-Zorrilla et al.(2014)
ETTIN
0.763 0.763
ARF2
M06714_2.00
Arabidopsis thaliana
NHTGTCKSHD

HDSMGACADN
Dap-seq
OMalley et al.(2016)
ARF2_col_v31
0.742 0.742
ARF8
M01697_2.00
Arabidopsis thaliana
NHTGTCGGN

NCCGACADN
PBM
Weirauch et al.(2014)
pTH8661
0.732 0.732
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_2800001 B3 134 236

Links

Other B3 family TFs
Other Physcomitrella patens TFs

Invalid Input OrderBy

774 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action