CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_030_00152
(
Aquilegia coerulea
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Aquca_030_00152
T022594_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARF16
M06708_2.00
Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA
Dap-seq
OMalley et al.(2016)
ARF16_col_b
0.907
0.907
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_030_00152.1
B3
113
215
FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRTENGDLCVGIRRAK
Aquca_030_00152.2
B3
113
215
FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRTENGDLCVGIRRAK
Aquca_030_00152.3
B3
113
215
FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRTENGDLCVGIRRAK
Links
Other
B3
family TFs
Other
Aquilegia coerulea
TFs
226 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy