Bostr.7365s0004 (Boechera stricta)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Bostr.7365s0004 T022698_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NGA4
M06707_2.00 		Arabidopsis thaliana
NHHBDYCAGGTRNHWH
DWDNYACCTGRHVDDN		 Dap-seq
OMalley et al.(2016)
NGA4_col_a 		0.901 0.901
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.7365s0004.1.p B3 36 131

Links

Other B3 family TFs
Other Boechera stricta TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NGA4 Arabidopsis thaliana AT4G01500 D 0.901
NGA4 Arabidopsis lyrata scaffold_604140.1 I 0.890
Carubv10001406m.g Capsella rubella Carubv10001406m.g I 0.868
Cagra.23502s0003 Capsella grandiflora Cagra.23502s0003 I 0.868
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.857
Bo00853s090 Brassica oleracea Bo00853s090 I 0.857
Bra008552 Brassica rapa Bra008552 I 0.835
Thhalv10028783m.g Eutrema salsugineum Thhalv10028783m.g I 0.824
Bostr.5325s0023 Boechera stricta Bostr.5325s0023 N 0.780
Carubv10009540m.g Capsella rubella Carubv10009540m.g N 0.769
Cagra.1968s0048 Capsella grandiflora Cagra.1968s0048 N 0.769
NGA3 Arabidopsis lyrata fgenesh2_kg.1__134__AT1G01030.1 N 0.769
NGA3 Arabidopsis thaliana AT1G01030 N 0.769
Bo5g002790 Brassica oleracea Bo5g002790 N 0.769
Thhalv10008068m.g Eutrema salsugineum Thhalv10008068m.g N 0.769
Bo3g001110 Brassica oleracea Bo3g001110 N 0.758
Ca_01368 Cicer arietinum Ca_01368 I 0.747
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.747
Bra037417 Brassica rapa Bra037417 N 0.747
Bra033294 Brassica rapa Bra033294 N 0.747
Pm028725 Prunus mume Pm028725 N 0.736
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.736
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.736
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.736
Cla006845 Citrullus lanatus Cla006845 I 0.736
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.736
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.736
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.736
PK21157.1 Cannabis sativa PK21157.1 I 0.736
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.736
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.725
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.725
OS10G0537100 Oryza sativa OS10G0537100 N 0.725
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.725
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.725
30076.m004471 Ricinus communis 30076.m004471 I 0.725
mgf023769m Mimulus guttatus mgf023769m N 0.725
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.725
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.725
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I 0.725
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.725
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.725
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.725
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.725
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.725
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.725
TCM_005014 Theobroma cacao TCM_005014 I 0.725
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.725
Bo8g097490 Brassica oleracea Bo8g097490 N 0.725
Bra007646 Brassica rapa Bra007646 N 0.725
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.725
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.725
Pm024248 Prunus mume Pm024248 I 0.725
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.725
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.725
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.725
OBART10G17010 Oryza barthii OBART10G17010 N 0.725
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.725
MDP0000288808 Malus domestica MDP0000288808 N 0.725
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.725
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.714
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.714
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.714
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.714
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.714
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.714
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.714
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I 0.714
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.714
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.714
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.714
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.714
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.714
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.714
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.714
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.714
OB03G11610 Oryza brachyantha OB03G11610 N 0.714
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.714
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.714
OBART03G01650 Oryza barthii OBART03G01650 N 0.714
OBART04G22880 Oryza barthii OBART04G22880 I 0.714
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.714
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.714
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.714
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.714
GRMZM2G125095 Zea mays GRMZM2G125095 N 0.714
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.714
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.714
NGA2 Arabidopsis thaliana AT3G61970 N 0.714
Bo9g004050 Brassica oleracea Bo9g004050 N 0.714
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.714
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.714
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.714
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.714
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.714
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.714
OS04G0581400 Oryza sativa OS04G0581400 I 0.714
TCM_015590 Theobroma cacao TCM_015590 I 0.714
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.714
Si036864m.g Setaria italica Si036864m.g N 0.714
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.714
OS03G0120900 Oryza sativa OS03G0120900 N 0.714
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.714
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.714
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.714
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.714
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.714
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.714
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.714
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.714
Bo4g099000 Brassica oleracea Bo4g099000 N 0.703
Bra000434 Brassica rapa Bra000434 N 0.703
Bo6g079210 Brassica oleracea Bo6g079210 N 0.703
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.703
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.703
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.703
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.703
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.703
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.703
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.703
Si039972m.g Setaria italica Si039972m.g N 0.703