Cagra.12385s0007 (Capsella grandiflora)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Cagra.12385s0007 T022744_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.12385s0007.1.p B3 284 385

Links

Other B3 family TFs
Other Capsella grandiflora TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Carubv10004194m.g Capsella rubella Carubv10004194m.g N 1.000
VAL2 Arabidopsis thaliana AT4G32010 N 1.000
HSL1 Arabidopsis lyrata scaffold_700997.1 N 1.000
Bra023968 Brassica rapa Bra023968 N 0.918
Bostr.7867s1055 Boechera stricta Bostr.7867s1055 N 0.918
Bo7g115570 Brassica oleracea Bo7g115570 N 0.918
Bo7g115560 Brassica oleracea Bo7g115560 N 0.918
Thhalv10024481m.g Eutrema salsugineum Thhalv10024481m.g N 0.918
evm.TU.supercontig_0.91 Carica papaya evm.TU.supercontig_0.91 N 0.859
29915.m000469 Ricinus communis 29915.m000469 N 0.856
Ciclev10011039m.g Citrus clementina Ciclev10011039m.g N 0.856
Gorai.005G004300 Gossypium raimondii Gorai.005G004300 N 0.856
Gorai.011G127500 Gossypium raimondii Gorai.011G127500 N 0.856
orange1.1g002708m.g Citrus sinensis orange1.1g002708m.g N 0.856
TCM_019701 Theobroma cacao TCM_019701 N 0.848
OS07G0679700 Oryza sativa OS07G0679700 N 0.845
OBART07G26400 Oryza barthii OBART07G26400 N 0.845
POPTR_0006s10880 Populus trichocarpa POPTR_0006s10880 N 0.845
ORUFI07G27410 Oryza rufipogon ORUFI07G27410 N 0.845
ONIVA07G26110 Oryza nivara ONIVA07G26110 N 0.845
POPTR_0016s14350 Populus trichocarpa POPTR_0016s14350 N 0.845
OLONG_008212 Oryza longistaminata OLONG_008212 N 0.845
OMERI07G23020 Oryza meridionalis OMERI07G23020 N 0.845
OGLUM07G26430 Oryza glumaepatula OGLUM07G26430 N 0.845
ORGLA07G0207500 Oryza glaberrima ORGLA07G0207500 N 0.845
cassava25238.valid.m1 Manihot esculenta cassava25238.valid.m1 N 0.845
SapurV1A.0065s0470 Salix purpurea SapurV1A.0065s0470 N 0.845
SapurV1A.0914s0080 Salix purpurea SapurV1A.0914s0080 N 0.845
PK13763.1 Cannabis sativa PK13763.1 N 0.845
Cucsa.045980 Cucumis sativus Cucsa.045980 N 0.845
OB07G31850 Oryza brachyantha OB07G31850 N 0.845
Traes_2DS_B1C947D2B Triticum aestivum Traes_2DS_B1C947D2B N 0.845
TRIUR3_04238 Triticum urartu TRIUR3_04238 N 0.845
HSL1 Vitis vinifera VIT_08s0058g01300 N 0.845
Traes_2BS_5B00A8C50 Triticum aestivum Traes_2BS_5B00A8C50 N 0.845
Traes_2AS_F4CEC9849 Triticum aestivum Traes_2AS_F4CEC9849 N 0.845
GSMUA_Achr8G01750_001 Musa acuminata GSMUA_Achr8G01750_001 N 0.845
F775_32613 Aegilops tauschii F775_32613 N 0.845
BGIOSGA023709 Oryza indica BGIOSGA023709 N 0.845
LPERR07G23240 Leersia perrieri LPERR07G23240 N 0.845
BRADI1G17680 Brachypodium distachyon BRADI1G17680 N 0.845
Lus10025226.g Linum usitatissimum Lus10025226.g N 0.838
PRUPE_ppa001234mg Prunus persica PRUPE_ppa001234mg N 0.835
BGIOSGA025947 Oryza indica BGIOSGA025947 N 0.835
Si028834m.g Setaria italica Si028834m.g N 0.835
Solyc02g079020.2 Solanum lycopersicum Solyc02g079020.2 N 0.835
AMTR_s00003p00266720 Amborella trichopoda AMTR_s00003p00266720 N 0.835
TCM_042290 Theobroma cacao TCM_042290 N 0.835
Ca_23185 Cicer arietinum Ca_23185 N 0.835
GLYMA01G32810 Glycine max GLYMA01G32810 N 0.835
gene13877-v1.0-hybrid Fragaria vesca gene13877-v1.0-hybrid N 0.835
Lus10022741.g Linum usitatissimum Lus10022741.g N 0.835
Lus10025142.g Linum usitatissimum Lus10025142.g N 0.835
Eucgr.F02704 Eucalyptus grandis Eucgr.F02704 N 0.835
Pavir.Ba00225 Panicum virgatum Pavir.Ba00225 N 0.835
Pm009906 Prunus mume Pm009906 N 0.835
PRUPE_ppa001220mg Prunus persica PRUPE_ppa001220mg N 0.835
Pavir.Bb03754 Panicum virgatum Pavir.Bb03754 N 0.835
Pm003031 Prunus mume Pm003031 N 0.835
GLYMA03G04330 Glycine max GLYMA03G04330 N 0.835
OPUNC07G17640 Oryza punctata OPUNC07G17640 N 0.835
ONIVA07G17160 Oryza nivara ONIVA07G17160 N 0.835
OPUNC07G24850 Oryza punctata OPUNC07G24850 N 0.835
ORGLA07G0151800 Oryza glaberrima ORGLA07G0151800 N 0.835
ORUFI07G19520 Oryza rufipogon ORUFI07G19520 N 0.835
PDK_20s13009463g004 Phoenix dactylifera PDK_20s13009463g004 N 0.835
OLONG_013183 Oryza longistaminata OLONG_013183 N 0.835
MTR_4g028130 Medicago truncatula MTR_4g028130 N 0.835
PDK_20s13009466g004 Phoenix dactylifera PDK_20s13009466g004 N 0.835
OBART07G18780 Oryza barthii OBART07G18780 N 0.835
LPERR07G16110 Leersia perrieri LPERR07G16110 N 0.835
OGLUM07G18530 Oryza glumaepatula OGLUM07G18530 N 0.835
PK09020.1 Cannabis sativa PK09020.1 N 0.835
OMERI07G15550 Oryza meridionalis OMERI07G15550 N 0.835
Solyc10g075030.1 Solanum lycopersicum Solyc10g075030.1 N 0.828
GSMUA_Achr5G27930_001 Musa acuminata GSMUA_Achr5G27930_001 N 0.828
VAL3 Vitis vinifera VIT_00s0181g00260 N 0.825
mgf007363m Mimulus guttatus mgf007363m N 0.825
Pavir.Ba00654 Panicum virgatum Pavir.Ba00654 N 0.825
evm.TU.supercontig_2.296 Carica papaya evm.TU.supercontig_2.296 N 0.825
SapurV1A.0215s0260 Salix purpurea SapurV1A.0215s0260 N 0.825
PK04158.1 Cannabis sativa PK04158.1 N 0.825
cassava41301.m1 Manihot esculenta cassava41301.m1 N 0.814
Pm000247 Prunus mume Pm000247 N 0.814
PRUPE_ppa001229mg Prunus persica PRUPE_ppa001229mg N 0.814
Si028829m.g Setaria italica Si028829m.g N 0.814
cassava39646.m1 Manihot esculenta cassava39646.m1 N 0.814
SapurV1A.0028s0060 Salix purpurea SapurV1A.0028s0060 N 0.814
Bo4g173060 Brassica oleracea Bo4g173060 N 0.814
MTR_2g011940 Medicago truncatula MTR_2g011940 N 0.814
Gorai.003G152700 Gossypium raimondii Gorai.003G152700 N 0.814
orange1.1g002489m.g Citrus sinensis orange1.1g002489m.g N 0.814
Cla018330 Citrullus lanatus Cla018330 N 0.814
Ciclev10014219m.g Citrus clementina Ciclev10014219m.g N 0.814
Cucsa.177010 Cucumis sativus Cucsa.177010 N 0.814
SapurV1A.0044s0150 Salix purpurea SapurV1A.0044s0150 N 0.814
SELMODRAFT_451631 Selaginella moellendorffii SELMODRAFT_451631 N 0.814
SELMODRAFT_451626 Selaginella moellendorffii SELMODRAFT_451626 N 0.814
Solyc06g082520.2 Solanum lycopersicum Solyc06g082520.2 N 0.808
GRMZM2G172621 Zea mays GRMZM2G172621 N 0.808
Sb02g043000 Sorghum bicolor Sb02g043000 N 0.808
GRMZM2G158162 Zea mays GRMZM2G158162 N 0.808
Pavir.Bb03074 Panicum virgatum Pavir.Bb03074 N 0.804
GSMUA_Achr8G03800_001 Musa acuminata GSMUA_Achr8G03800_001 N 0.804
mgf024907m Mimulus guttatus mgf024907m N 0.804
Bostr.24513s0191 Boechera stricta Bostr.24513s0191 N 0.804
Cagra.0567s0011 Capsella grandiflora Cagra.0567s0011 N 0.804
Cla008225 Citrullus lanatus Cla008225 N 0.804
GLYMA13G31970 Glycine max GLYMA13G31970 N 0.804
Carubv10022654m.g Capsella rubella Carubv10022654m.g N 0.804
Bra018313 Brassica rapa Bra018313 N 0.804
TCM_029976 Theobroma cacao TCM_029976 N 0.804
Bo4g058460 Brassica oleracea Bo4g058460 N 0.804
GRMZM2G008356 Zea mays GRMZM2G008356 N 0.804
Bra021635 Brassica rapa Bra021635 N 0.804
GLYMA15G07350 Glycine max GLYMA15G07350 N 0.804
Bo3g024640 Brassica oleracea Bo3g024640 N 0.804
Bra022801 Brassica rapa Bra022801 N 0.804
Sb02g036430 Sorghum bicolor Sb02g036430 N 0.804
Ciclev10000225m.g Citrus clementina Ciclev10000225m.g N 0.798
POPTR_0019s15070 Populus trichocarpa POPTR_0019s15070 N 0.798
POPTR_0004s03530 Populus trichocarpa POPTR_0004s03530 N 0.798
Thhalv10016263m.g Eutrema salsugineum Thhalv10016263m.g N 0.794
MDP0000267885 Malus domestica MDP0000267885 N 0.794
cassava13133.valid.m1 Manihot esculenta cassava13133.valid.m1 N 0.794
Ca_08924 Cicer arietinum Ca_08924 N 0.794
MLOC_4657 Hordeum vulgare MLOC_4657 N 0.794
MDP0000127640 Malus domestica MDP0000127640 N 0.794
HSI2 Arabidopsis lyrata scaffold_401535.1 N 0.794
POPTR_0013s15330 Populus trichocarpa POPTR_0013s15330 N 0.794
GLYMA11G31234 Glycine max GLYMA11G31234 N 0.794
Traes_2AS_C4FD8E351 Triticum aestivum Traes_2AS_C4FD8E351 N 0.794
mgf007846m Mimulus guttatus mgf007846m N 0.794
Traes_2DS_3E4E3BEFC Triticum aestivum Traes_2DS_3E4E3BEFC N 0.794
Traes_2BS_A61094919 Triticum aestivum Traes_2BS_A61094919 N 0.794
GLYMA18G05840 Glycine max GLYMA18G05840 N 0.794
Eucgr.L01473 Eucalyptus grandis Eucgr.L01473 N 0.794
POPTR_0011s04340 Populus trichocarpa POPTR_0011s04340 N 0.788
gene28098-v1.0-hybrid Fragaria vesca gene28098-v1.0-hybrid N 0.788
Gorai.011G022400 Gossypium raimondii Gorai.011G022400 N 0.788
VAL1 Arabidopsis thaliana AT2G30470 N 0.784
MDP0000229344 Malus domestica MDP0000229344 N 0.784
29917.m001969 Ricinus communis 29917.m001969 N 0.784
mgf013365m Mimulus guttatus mgf013365m N 0.784
GSMUA_Achr4G23790_001 Musa acuminata GSMUA_Achr4G23790_001 N 0.784
Eucgr.E03465 Eucalyptus grandis Eucgr.E03465 N 0.784
29976.m000497 Ricinus communis 29976.m000497 N 0.784
gene30690-v1.0-hybrid Fragaria vesca gene30690-v1.0-hybrid N 0.784
Gorai.009G173100 Gossypium raimondii Gorai.009G173100 N 0.784
OS07G0563350 Oryza sativa OS07G0563350 N 0.781
BRADI1G24720 Brachypodium distachyon BRADI1G24720 N 0.778
GSMUA_Achr7G00120_001 Musa acuminata GSMUA_Achr7G00120_001 N 0.778
Aquca_008_00005 Aquilegia coerulea Aquca_008_00005 N 0.773
MTR_3g467380 Medicago truncatula MTR_3g467380 N 0.773
Aquca_063_00016 Aquilegia coerulea Aquca_063_00016 N 0.773
VIT_06s0004g08100 Vitis vinifera VIT_06s0004g08100 N 0.773
SapurV1A.1353s0040 Salix purpurea SapurV1A.1353s0040 N 0.768
Eucgr.B04027 Eucalyptus grandis Eucgr.B04027 N 0.763
Lus10018440.g Linum usitatissimum Lus10018440.g N 0.763
GLYMA14G38492 Glycine max GLYMA14G38492 N 0.742
Aquca_045_00208 Aquilegia coerulea Aquca_045_00208 N 0.742
LjSGA_009543.1 Lotus japonicus LjSGA_009543.1 N 0.732
GLYMA02G40280 Glycine max GLYMA02G40280 N 0.722
Thhalv10024526m.g Eutrema salsugineum Thhalv10024526m.g N 0.722
Bostr.10689s0100 Boechera stricta Bostr.10689s0100 N 0.722
PDK_20s1314471g001 Phoenix dactylifera PDK_20s1314471g001 N 0.707
Bo1g024250 Brassica oleracea Bo1g024250 N 0.701
Ca_15659 Cicer arietinum Ca_15659 N 0.701