Cagra.2519s0017 (Capsella grandiflora)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Cagra.2519s0017 T022784_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF3
M00852_2.00 		Arabidopsis thaliana
NKGTYBNN
NNVRACMN		 PBM
Franco-Zorrilla et al.(2014)
ETTIN 		0.838 0.838
ARF8
M01697_2.00 		Arabidopsis thaliana
NHTGTCGGN
NCCGACADN		 PBM
Weirauch et al.(2014)
pTH8661 		0.717 0.717
ARF2
M06714_2.00 		Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN		 Dap-seq
OMalley et al.(2016)
ARF2_col_v31 		0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2519s0017.1.p B3 171 273

Links

Other B3 family TFs
Other Capsella grandiflora TFs

Invalid Input OrderBy

667 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action