Carubv10014420m.g (Capsella rubella)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Carubv10014420m.g T022867_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10014420m B3 125 216

Links

Other B3 family TFs
Other Capsella rubella TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.19424s0744 Boechera stricta Bostr.19424s0744 N 0.935
Cagra.5742s0010 Capsella grandiflora Cagra.5742s0010 N 0.902
Bra035129 Brassica rapa Bra035129 N 0.826
Bo6g124000 Brassica oleracea Bo6g124000 N 0.826
fgenesh2_kg.3__2134__AT3G19184.1 Arabidopsis lyrata fgenesh2_kg.3__2134__AT3G19184.1 N 0.804
AT3G19184 Arabidopsis thaliana AT3G19184 N 0.804
evm.TU.supercontig_62.23 Carica papaya evm.TU.supercontig_62.23 N 0.783
Lus10014044.g Linum usitatissimum Lus10014044.g N 0.783
mgf008645m Mimulus guttatus mgf008645m N 0.772
Thhalv10019015m.g Eutrema salsugineum Thhalv10019015m.g N 0.772
Ciclev10029072m.g Citrus clementina Ciclev10029072m.g N 0.739
orange1.1g036915m.g Citrus sinensis orange1.1g036915m.g N 0.739
Cla016258 Citrullus lanatus Cla016258 N 0.739
Cucsa.219930 Cucumis sativus Cucsa.219930 N 0.728
Gorai.013G042700 Gossypium raimondii Gorai.013G042700 N 0.728
PK25650.1 Cannabis sativa PK25650.1 N 0.728
TCM_007039 Theobroma cacao TCM_007039 N 0.728
Gorai.002G131600 Gossypium raimondii Gorai.002G131600 N 0.717
PGSC0003DMG400025792 Solanum tuberosum PGSC0003DMG400025792 N 0.717
PRUPE_ppb024440mg Prunus persica PRUPE_ppb024440mg N 0.717
Si014404m.g Setaria italica Si014404m.g N 0.707
OB06G15600 Oryza brachyantha OB06G15600 N 0.707
OLONG_013315 Oryza longistaminata OLONG_013315 N 0.707
LPERR06G05590 Leersia perrieri LPERR06G05590 N 0.707
F775_06135 Aegilops tauschii F775_06135 N 0.707
BGIOSGA022464 Oryza indica BGIOSGA022464 N 0.707
OMERI06G07230 Oryza meridionalis OMERI06G07230 N 0.707
ONIVA06G07020 Oryza nivara ONIVA06G07020 N 0.707
TCM_033870 Theobroma cacao TCM_033870 N 0.707
Traes_7BS_9D1E05CB7 Triticum aestivum Traes_7BS_9D1E05CB7 N 0.707
OS06G0194400 Oryza sativa OS06G0194400 N 0.707
ORUFI06G06290 Oryza rufipogon ORUFI06G06290 N 0.707
ORGLA06G0055700 Oryza glaberrima ORGLA06G0055700 N 0.707
Traes_7DS_A234A13E1 Triticum aestivum Traes_7DS_A234A13E1 N 0.707