Ciclev10011039m.g (Citrus clementina)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Ciclev10011039m.g T022942_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10011039m B3 301 402

Links

Other B3 family TFs
Other Citrus clementina TFs

186 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
orange1.1g002708m.g Citrus sinensis orange1.1g002708m.g N 1.000
29915.m000469 Ricinus communis 29915.m000469 N 1.000
SapurV1A.0065s0470 Salix purpurea SapurV1A.0065s0470 N 0.990
HSL1 Vitis vinifera VIT_08s0058g01300 N 0.990
cassava25238.valid.m1 Manihot esculenta cassava25238.valid.m1 N 0.990
Lus10025226.g Linum usitatissimum Lus10025226.g N 0.990
Solyc10g075030.1 Solanum lycopersicum Solyc10g075030.1 N 0.990
POPTR_0006s10880 Populus trichocarpa POPTR_0006s10880 N 0.990
POPTR_0016s14350 Populus trichocarpa POPTR_0016s14350 N 0.990
SapurV1A.0914s0080 Salix purpurea SapurV1A.0914s0080 N 0.990
Eucgr.F02704 Eucalyptus grandis Eucgr.F02704 N 0.980
Gorai.011G127500 Gossypium raimondii Gorai.011G127500 N 0.980
evm.TU.supercontig_0.91 Carica papaya evm.TU.supercontig_0.91 N 0.980
Pm003031 Prunus mume Pm003031 N 0.980
PRUPE_ppa001234mg Prunus persica PRUPE_ppa001234mg N 0.980
gene13877-v1.0-hybrid Fragaria vesca gene13877-v1.0-hybrid N 0.980
PK13763.1 Cannabis sativa PK13763.1 N 0.970
mgf007363m Mimulus guttatus mgf007363m N 0.970
Lus10025142.g Linum usitatissimum Lus10025142.g N 0.970
Gorai.005G004300 Gossypium raimondii Gorai.005G004300 N 0.970
TCM_019701 Theobroma cacao TCM_019701 N 0.970
Cucsa.177010 Cucumis sativus Cucsa.177010 N 0.960
Cla018330 Citrullus lanatus Cla018330 N 0.960
MTR_4g028130 Medicago truncatula MTR_4g028130 N 0.960
Ca_23185 Cicer arietinum Ca_23185 N 0.960
GLYMA01G32810 Glycine max GLYMA01G32810 N 0.960
GLYMA03G04330 Glycine max GLYMA03G04330 N 0.960
Bostr.7867s1055 Boechera stricta Bostr.7867s1055 N 0.939
TCM_042290 Theobroma cacao TCM_042290 N 0.939
Bra023968 Brassica rapa Bra023968 N 0.939
Bo7g115570 Brassica oleracea Bo7g115570 N 0.939
Thhalv10024481m.g Eutrema salsugineum Thhalv10024481m.g N 0.939
AMTR_s00003p00266720 Amborella trichopoda AMTR_s00003p00266720 N 0.939
Bo7g115560 Brassica oleracea Bo7g115560 N 0.939
PDK_20s13009463g004 Phoenix dactylifera PDK_20s13009463g004 N 0.929
Gorai.003G152700 Gossypium raimondii Gorai.003G152700 N 0.929
Lus10022741.g Linum usitatissimum Lus10022741.g N 0.929
gene28098-v1.0-hybrid Fragaria vesca gene28098-v1.0-hybrid N 0.919
Pm000247 Prunus mume Pm000247 N 0.919
PRUPE_ppa001229mg Prunus persica PRUPE_ppa001229mg N 0.919
PRUPE_ppa001220mg Prunus persica PRUPE_ppa001220mg N 0.919
Pm009906 Prunus mume Pm009906 N 0.919
SapurV1A.0044s0150 Salix purpurea SapurV1A.0044s0150 N 0.919
MDP0000127640 Malus domestica MDP0000127640 N 0.919
MDP0000267885 Malus domestica MDP0000267885 N 0.919
PK09020.1 Cannabis sativa PK09020.1 N 0.918
ORUFI07G27410 Oryza rufipogon ORUFI07G27410 N 0.909
OS07G0679700 Oryza sativa OS07G0679700 N 0.909
POPTR_0011s04340 Populus trichocarpa POPTR_0011s04340 N 0.909
Sb02g043000 Sorghum bicolor Sb02g043000 N 0.909
Ciclev10000225m.g Citrus clementina Ciclev10000225m.g N 0.909
Traes_2DS_B1C947D2B Triticum aestivum Traes_2DS_B1C947D2B N 0.909
Traes_2AS_F4CEC9849 Triticum aestivum Traes_2AS_F4CEC9849 N 0.909
TRIUR3_04238 Triticum urartu TRIUR3_04238 N 0.909
Cucsa.045980 Cucumis sativus Cucsa.045980 N 0.909
Traes_2BS_5B00A8C50 Triticum aestivum Traes_2BS_5B00A8C50 N 0.909
ORGLA07G0207500 Oryza glaberrima ORGLA07G0207500 N 0.909
Cla008225 Citrullus lanatus Cla008225 N 0.909
OMERI07G23020 Oryza meridionalis OMERI07G23020 N 0.909
OBART07G26400 Oryza barthii OBART07G26400 N 0.909
MDP0000229344 Malus domestica MDP0000229344 N 0.909
OGLUM07G26430 Oryza glumaepatula OGLUM07G26430 N 0.909
F775_32613 Aegilops tauschii F775_32613 N 0.909
GLYMA18G05840 Glycine max GLYMA18G05840 N 0.909
LPERR07G23240 Leersia perrieri LPERR07G23240 N 0.909
GLYMA11G31234 Glycine max GLYMA11G31234 N 0.909
OB07G31850 Oryza brachyantha OB07G31850 N 0.909
OLONG_008212 Oryza longistaminata OLONG_008212 N 0.909
GRMZM2G158162 Zea mays GRMZM2G158162 N 0.909
BGIOSGA023709 Oryza indica BGIOSGA023709 N 0.909
PDK_20s13009466g004 Phoenix dactylifera PDK_20s13009466g004 N 0.909
ONIVA07G26110 Oryza nivara ONIVA07G26110 N 0.909
PK04158.1 Cannabis sativa PK04158.1 N 0.909
BRADI1G17680 Brachypodium distachyon BRADI1G17680 N 0.909
GRMZM2G172621 Zea mays GRMZM2G172621 N 0.909
Solyc06g082520.2 Solanum lycopersicum Solyc06g082520.2 N 0.899
orange1.1g002489m.g Citrus sinensis orange1.1g002489m.g N 0.899
VAL3 Vitis vinifera VIT_00s0181g00260 N 0.899
BGIOSGA025947 Oryza indica BGIOSGA025947 N 0.899
SapurV1A.0028s0060 Salix purpurea SapurV1A.0028s0060 N 0.899
Pavir.Bb03754 Panicum virgatum Pavir.Bb03754 N 0.899
Solyc02g079020.2 Solanum lycopersicum Solyc02g079020.2 N 0.899
Pavir.Ba00225 Panicum virgatum Pavir.Ba00225 N 0.899
Si028834m.g Setaria italica Si028834m.g N 0.899
OMERI07G15550 Oryza meridionalis OMERI07G15550 N 0.899
OLONG_013183 Oryza longistaminata OLONG_013183 N 0.899
OGLUM07G18530 Oryza glumaepatula OGLUM07G18530 N 0.899
ONIVA07G17160 Oryza nivara ONIVA07G17160 N 0.899
POPTR_0004s03530 Populus trichocarpa POPTR_0004s03530 N 0.899
ORUFI07G19520 Oryza rufipogon ORUFI07G19520 N 0.899
OPUNC07G17640 Oryza punctata OPUNC07G17640 N 0.899
ORGLA07G0151800 Oryza glaberrima ORGLA07G0151800 N 0.899
OBART07G18780 Oryza barthii OBART07G18780 N 0.899
GSMUA_Achr8G03800_001 Musa acuminata GSMUA_Achr8G03800_001 N 0.899
LPERR07G16110 Leersia perrieri LPERR07G16110 N 0.899
Ciclev10014219m.g Citrus clementina Ciclev10014219m.g N 0.899
GSMUA_Achr8G01750_001 Musa acuminata GSMUA_Achr8G01750_001 N 0.899
GSMUA_Achr5G27930_001 Musa acuminata GSMUA_Achr5G27930_001 N 0.899
evm.TU.supercontig_2.296 Carica papaya evm.TU.supercontig_2.296 N 0.899
OS07G0563350 Oryza sativa OS07G0563350 N 0.890
cassava41301.m1 Manihot esculenta cassava41301.m1 N 0.889
cassava13133.valid.m1 Manihot esculenta cassava13133.valid.m1 N 0.889
Pavir.Ba00654 Panicum virgatum Pavir.Ba00654 N 0.889
Gorai.011G022400 Gossypium raimondii Gorai.011G022400 N 0.889
Pavir.Bb03074 Panicum virgatum Pavir.Bb03074 N 0.889
cassava39646.m1 Manihot esculenta cassava39646.m1 N 0.889
29976.m000497 Ricinus communis 29976.m000497 N 0.889
Traes_2BS_A61094919 Triticum aestivum Traes_2BS_A61094919 N 0.889
Bo4g173060 Brassica oleracea Bo4g173060 N 0.889
Si028829m.g Setaria italica Si028829m.g N 0.889
GRMZM2G008356 Zea mays GRMZM2G008356 N 0.889
GLYMA15G07350 Glycine max GLYMA15G07350 N 0.889
Bra021635 Brassica rapa Bra021635 N 0.889
GLYMA13G31970 Glycine max GLYMA13G31970 N 0.889
MLOC_4657 Hordeum vulgare MLOC_4657 N 0.889
GSMUA_Achr7G00120_001 Musa acuminata GSMUA_Achr7G00120_001 N 0.889
Sb02g036430 Sorghum bicolor Sb02g036430 N 0.889
Ca_08924 Cicer arietinum Ca_08924 N 0.889
Traes_2DS_3E4E3BEFC Triticum aestivum Traes_2DS_3E4E3BEFC N 0.889
Traes_2AS_C4FD8E351 Triticum aestivum Traes_2AS_C4FD8E351 N 0.889
Bostr.24513s0191 Boechera stricta Bostr.24513s0191 N 0.888
Carubv10022654m.g Capsella rubella Carubv10022654m.g N 0.888
Cagra.0567s0011 Capsella grandiflora Cagra.0567s0011 N 0.879
MTR_2g011940 Medicago truncatula MTR_2g011940 N 0.879
Eucgr.L01473 Eucalyptus grandis Eucgr.L01473 N 0.879
GSMUA_Achr4G23790_001 Musa acuminata GSMUA_Achr4G23790_001 N 0.879
BRADI1G24720 Brachypodium distachyon BRADI1G24720 N 0.879
Bo3g024640 Brassica oleracea Bo3g024640 N 0.879
VIT_06s0004g08100 Vitis vinifera VIT_06s0004g08100 N 0.879
Bra022801 Brassica rapa Bra022801 N 0.879
TCM_029976 Theobroma cacao TCM_029976 N 0.879
Eucgr.E03465 Eucalyptus grandis Eucgr.E03465 N 0.875
HSI2 Arabidopsis lyrata scaffold_401535.1 N 0.869
Gorai.009G173100 Gossypium raimondii Gorai.009G173100 N 0.869
Bo4g058460 Brassica oleracea Bo4g058460 N 0.869
Bra018313 Brassica rapa Bra018313 N 0.869
MTR_3g467380 Medicago truncatula MTR_3g467380 N 0.869
Thhalv10016263m.g Eutrema salsugineum Thhalv10016263m.g N 0.869
POPTR_0019s15070 Populus trichocarpa POPTR_0019s15070 N 0.869
LjSGA_029833.1 Lotus japonicus LjSGA_029833.1 N 0.867
MLOC_36861 Hordeum vulgare MLOC_36861 N 0.860
POPTR_0013s15330 Populus trichocarpa POPTR_0013s15330 N 0.859
SapurV1A.0215s0260 Salix purpurea SapurV1A.0215s0260 N 0.859
SELMODRAFT_451631 Selaginella moellendorffii SELMODRAFT_451631 N 0.859
29917.m001969 Ricinus communis 29917.m001969 N 0.859
VAL1 Arabidopsis thaliana AT2G30470 N 0.859
SELMODRAFT_451626 Selaginella moellendorffii SELMODRAFT_451626 N 0.859
gene30690-v1.0-hybrid Fragaria vesca gene30690-v1.0-hybrid N 0.857
VAL2 Arabidopsis thaliana AT4G32010 N 0.856
Cagra.12385s0007 Capsella grandiflora Cagra.12385s0007 N 0.856
Carubv10004194m.g Capsella rubella Carubv10004194m.g N 0.856
HSL1 Arabidopsis lyrata scaffold_700997.1 N 0.856
PDK_20s1455001g004 Phoenix dactylifera PDK_20s1455001g004 N 0.855
Aquca_063_00016 Aquilegia coerulea Aquca_063_00016 N 0.848
SapurV1A.1353s0040 Salix purpurea SapurV1A.1353s0040 N 0.848
Eucgr.B04027 Eucalyptus grandis Eucgr.B04027 N 0.848
Lus10018440.g Linum usitatissimum Lus10018440.g N 0.848
Aquca_045_00208 Aquilegia coerulea Aquca_045_00208 N 0.847
LjSGA_009543.1 Lotus japonicus LjSGA_009543.1 N 0.838
GLYMA14G38492 Glycine max GLYMA14G38492 N 0.838
mgf024907m Mimulus guttatus mgf024907m N 0.837
mgf013365m Mimulus guttatus mgf013365m N 0.828
Aquca_008_00005 Aquilegia coerulea Aquca_008_00005 N 0.828
GLYMA02G40280 Glycine max GLYMA02G40280 N 0.828
mgf007846m Mimulus guttatus mgf007846m N 0.818
Cucsa.111990 Cucumis sativus Cucsa.111990 N 0.804
GLYMA09G15521 Glycine max GLYMA09G15521 N 0.803
OPUNC07G24850 Oryza punctata OPUNC07G24850 N 0.798
Ca_15659 Cicer arietinum Ca_15659 N 0.796
PDK_20s1314471g001 Phoenix dactylifera PDK_20s1314471g001 N 0.793
Bostr.10689s0100 Boechera stricta Bostr.10689s0100 N 0.788
Ca_00244 Cicer arietinum Ca_00244 N 0.781
Bo1g024250 Brassica oleracea Bo1g024250 N 0.778
Bra013535 Brassica rapa Bra013535 N 0.778
Thhalv10024526m.g Eutrema salsugineum Thhalv10024526m.g N 0.768
MTR_5g075410 Medicago truncatula MTR_5g075410 N 0.763
Carubv10004192m.g Capsella rubella Carubv10004192m.g N 0.758
PDK_20s1397381g002 Phoenix dactylifera PDK_20s1397381g002 N 0.758
F775_30051 Aegilops tauschii F775_30051 N 0.750
Cagra.3519s0007 Capsella grandiflora Cagra.3519s0007 N 0.747
orange1.1g039386m.g Citrus sinensis orange1.1g039386m.g N 0.740
SELMODRAFT_451634 Selaginella moellendorffii SELMODRAFT_451634 N 0.737
SELMODRAFT_451635 Selaginella moellendorffii SELMODRAFT_451635 N 0.737
Eucgr.E03467 Eucalyptus grandis Eucgr.E03467 N 0.727
MDP0000274788 Malus domestica MDP0000274788 N 0.717
Eucgr.L01474 Eucalyptus grandis Eucgr.L01474 N 0.704