evm.TU.supercontig_70.84 (Carica papaya)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 evm.TU.supercontig_70.84 T023151_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FUS3
M06706_2.00 		Arabidopsis thaliana
WNHWTGCATGYDHDW
WHDHRCATGCAWDNW		 Dap-seq
OMalley et al.(2016)
FUS3_col_a 		0.775 0.775
FUS3
M09773_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FUS3_Q2 		0.775 0.775
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_70.84 B3 79 163

Links

Other B3 family TFs
Other Carica papaya TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_017321 Theobroma cacao TCM_017321 I 0.900
Pm016099 Prunus mume Pm016099 I 0.887
30131.m006860 Ricinus communis 30131.m006860 I 0.875
Ciclev10016085m.g Citrus clementina Ciclev10016085m.g I 0.838
Lus10012572.g Linum usitatissimum Lus10012572.g I 0.812
Ca_05976 Cicer arietinum Ca_05976 I 0.812
POPTR_0017s08820 Populus trichocarpa POPTR_0017s08820 I 0.812
GLYMA19G27336 Glycine max GLYMA19G27336 I 0.812
Cla009252 Citrullus lanatus Cla009252 I 0.800
cassava11393.m1 Manihot esculenta cassava11393.m1 I 0.800
GLYMA16G05480 Glycine max GLYMA16G05480 I 0.800
POPTR_0001s32990 Populus trichocarpa POPTR_0001s32990 I 0.787
FUS3 Arabidopsis thaliana AT3G26790 D 0.775
Bo00285s530 Brassica oleracea Bo00285s530 I 0.762
Bra032953 Brassica rapa Bra032953 I 0.762
FUS3 Arabidopsis lyrata fgenesh2_kg.5__447__AT3G26790.1 I 0.762
Gorai.001G273500 Gossypium raimondii Gorai.001G273500 I 0.714
PRUPE_ppa021307mg Prunus persica PRUPE_ppa021307mg I 0.704