gene16050-v1.0-hybrid (Fragaria vesca)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 gene16050-v1.0-hybrid T023214_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna16050.1-v1.0-hybrid B3 223 325

Links

Other B3 family TFs
Other Fragaria vesca TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I 0.804
Cla022413 Citrullus lanatus Cla022413 I 0.763
Pm019126 Prunus mume Pm019126 I 0.845
29908.m005953 Ricinus communis 29908.m005953 I 0.784
cassava36161.valid.m1 Manihot esculenta cassava36161.valid.m1 I 0.814
Cucsa.381330 Cucumis sativus Cucsa.381330 I 0.732
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I 0.714
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.804
gene02234-v1.0-hybrid Fragaria vesca gene02234-v1.0-hybrid I 0.928
Gorai.009G241900 Gossypium raimondii Gorai.009G241900 I 0.742
Gorai.010G046000 Gossypium raimondii Gorai.010G046000 I 0.753
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.724
MDP0000256621 Malus domestica MDP0000256621 I 0.835
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.701
SapurV1A.0010s0540 Salix purpurea SapurV1A.0010s0540 I 0.804
SapurV1A.0331s0130 Salix purpurea SapurV1A.0331s0130 I 0.804
TCM_035002 Theobroma cacao TCM_035002 I 0.794
Ciclev10000693m.g Citrus clementina Ciclev10000693m.g I 0.784
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I 0.866
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.701
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.701
GSMUA_Achr9G29480_001 Musa acuminata GSMUA_Achr9G29480_001 I 0.732
orange1.1g008078m.g Citrus sinensis orange1.1g008078m.g I 0.784
OBART10G13410 Oryza barthii OBART10G13410 I 0.701
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.701
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.701
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.701
POPTR_0005s16320 Populus trichocarpa POPTR_0005s16320 I 0.804
POPTR_0002s09050 Populus trichocarpa POPTR_0002s09050 I 0.794
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.701
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.701
ARF22 Oryza sativa OS10G0479900 I 0.701
ARF17 Arabidopsis lyrata scaffold_202748.1 N 0.722
Bo6g081980 Brassica oleracea Bo6g081980 N 0.711
Bra003665 Brassica rapa Bra003665 N 0.711
MTR_3g073420 Medicago truncatula MTR_3g073420 N 0.704
MDP0000232116 Malus domestica MDP0000232116 N 0.724
Lus10024754.g Linum usitatissimum Lus10024754.g N 0.753
Lus10024753.g Linum usitatissimum Lus10024753.g N 0.742
Bostr.20129s0222 Boechera stricta Bostr.20129s0222 N 0.711
Cagra.0096s0050 Capsella grandiflora Cagra.0096s0050 N 0.753
Carubv10019991m.g Capsella rubella Carubv10019991m.g N 0.753
ARF17 Arabidopsis thaliana AT1G77850 N 0.732
Lus10009770.g Linum usitatissimum Lus10009770.g N 0.742