CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene27792-v1.0-hybrid
(
Fragaria vesca
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
gene27792-v1.0-hybrid
T023255_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna27792.1-v1.0-hybrid
B3
130
232
FSKILTPSDTSTHGGFSVPKRHAEDFFPPLDLFQQPPVQELTAKDLHGVQWHFRHIYRGQPKRHLLTSGWSTFVTAKKLVPGDVCIFVRGENGELRVGIRRAT
Links
Other
B3
family TFs
Other
Fragaria vesca
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_9.161
Carica papaya
evm.TU.supercontig_9.161
I
0.802
PK04762.1
Cannabis sativa
PK04762.1
I
0.776
Aquca_003_00899
Aquilegia coerulea
Aquca_003_00899
I
0.771
orange1.1g005060m.g
Citrus sinensis
orange1.1g005060m.g
I
0.763
Ciclev10019257m.g
Citrus clementina
Ciclev10019257m.g
I
0.763
cassava32762.m1
Manihot esculenta
cassava32762.m1
I
0.760
Pm019941
Prunus mume
Pm019941
I
0.755
PRUPE_ppa022314mg
Prunus persica
PRUPE_ppa022314mg
I
0.755
GLYMA03G36710
Glycine max
GLYMA03G36710
N
0.742
SELMODRAFT_166729
Selaginella moellendorffii
SELMODRAFT_166729
I
0.740
GLYMA19G39340
Glycine max
GLYMA19G39340
N
0.737
Solyc12g006350.1
Solanum lycopersicum
Solyc12g006350.1
I
0.736
VIT_07s0104g01230
Vitis vinifera
VIT_07s0104g01230
I
0.735
GRMZM2G137413
Zea mays
GRMZM2G137413
I
0.726
Si016562m.g
Setaria italica
Si016562m.g
I
0.726
MDP0000123466
Malus domestica
MDP0000123466
I
0.724
Cucsa.052860
Cucumis sativus
Cucsa.052860
I
0.719
SELMODRAFT_430287
Selaginella moellendorffii
SELMODRAFT_430287
I
0.719
SELMODRAFT_437944
Selaginella moellendorffii
SELMODRAFT_437944
I
0.719
SELMODRAFT_438973
Selaginella moellendorffii
SELMODRAFT_438973
I
0.719
Pavir.Aa01676
Panicum virgatum
Pavir.Aa01676
I
0.719
GRMZM2G702026
Zea mays
GRMZM2G702026
I
0.719
TCM_029792
Theobroma cacao
TCM_029792
I
0.717
OB02G28170
Oryza brachyantha
OB02G28170
I
0.716
Pavir.Ab01961
Panicum virgatum
Pavir.Ab01961
I
0.716
GSMUA_Achr6G29070_001
Musa acuminata
GSMUA_Achr6G29070_001
I
0.716
Gorai.007G131900
Gossypium raimondii
Gorai.007G131900
I
0.714
estExt_Genewise1.C_2800001
Physcomitrella patens
estExt_Genewise1.C_2800001
I
0.711
Pavir.Gb01617
Panicum virgatum
Pavir.Gb01617
I
0.708
GRMZM2G017187
Zea mays
GRMZM2G017187
I
0.708
Pavir.Ga01750
Panicum virgatum
Pavir.Ga01750
I
0.708
OB05G33320
Oryza brachyantha
OB05G33320
I
0.708
Cla000568
Citrullus lanatus
Cla000568
I
0.708
Si009558m.g
Setaria italica
Si009558m.g
I
0.708
chr3.CM0111.110.nd
Lotus japonicus
chr3.CM0111.110.nd
I
0.704
TCM_004526
Theobroma cacao
TCM_004526
I
0.704
PGSC0003DMG400028826
Solanum tuberosum
PGSC0003DMG400028826
I
0.701
gw1.341.65.1
Physcomitrella patens
gw1.341.65.1
I
0.701