CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.006G087600
(
Gossypium raimondii
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Gorai.006G087600
T023337_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LEC2
M01695_2.00
Arabidopsis thaliana
MTGCATGC
GCATGCAK
PBM
Weirauch et al.(2014)
pTH8181
0.735
0.735
LEC2
M02653_2.00
Arabidopsis thaliana
NDDYGCATGNN
NNCATGCRHHN
SELEX
Mathelier et al.(2014)
MA0581.1
0.735
0.735
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.006G087600.1
B3
325
426
LKKELKNSDVGSLGRIVLPKRDAEVNLPPLSDKEGIQVMIKDVYSNHMWTLKYKFWSNNKSRMYVLENTGDFVKQNGLGTGDSLTLYEDESKNLYFSITKVA
Links
Other
B3
family TFs
Other
Gossypium raimondii
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy