Gorai.007G131900 (Gossypium raimondii)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Gorai.007G131900 T023347_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF2
M06714_2.00 		Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN		 Dap-seq
OMalley et al.(2016)
ARF2_col_v31 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.007G131900.1 B3 145 248

Links

Other B3 family TFs
Other Gossypium raimondii TFs

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_004526 Theobroma cacao TCM_004526 I 0.837
PK04762.1 Cannabis sativa PK04762.1 I 0.796
PRUPE_ppa022314mg Prunus persica PRUPE_ppa022314mg I 0.776
VIT_07s0104g01230 Vitis vinifera VIT_07s0104g01230 I 0.776
Pm019941 Prunus mume Pm019941 I 0.765
POPTR_0014s12980 Populus trichocarpa POPTR_0014s12980 I 0.765
Ciclev10019257m.g Citrus clementina Ciclev10019257m.g I 0.763
orange1.1g005060m.g Citrus sinensis orange1.1g005060m.g I 0.763
XM_002320618.1 Populus trichocarpa POPTR_0020s00210 I 0.755
MDP0000123466 Malus domestica MDP0000123466 I 0.755
TCM_029792 Theobroma cacao TCM_029792 I 0.755
GLYMA19G39340 Glycine max GLYMA19G39340 N 0.747
Cucsa.156920 Cucumis sativus Cucsa.156920 I 0.746
POPTR_0004s23770 Populus trichocarpa POPTR_0004s23770 I 0.735
TCM_008374 Theobroma cacao TCM_008374 I 0.735
ARF1 Vitis vinifera VIT_12s0035g01800 I 0.735
PK12669.1 Cannabis sativa PK12669.1 I 0.735
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.735
VIT_01s0244g00150 Vitis vinifera VIT_01s0244g00150 I 0.735
Ciclev10030696m.g Citrus clementina Ciclev10030696m.g I 0.732
Eucgr.K02197 Eucalyptus grandis Eucgr.K02197 I 0.732
GLYMA16G00220 Glycine max GLYMA16G00220 I 0.732
Traes_3DL_1FC3735D9 Triticum aestivum Traes_3DL_1FC3735D9 I 0.732
MDP0000929655 Malus domestica MDP0000929655 I 0.732
MTR_2g005240 Medicago truncatula MTR_2g005240 I 0.732
LjSGA_022281.1 Lotus japonicus LjSGA_022281.1 I 0.732
orange1.1g005491m.g Citrus sinensis orange1.1g005491m.g I 0.725
chr4.CM0175.280.nc Lotus japonicus chr4.CM0175.280.nc I 0.724
mgf006511m Mimulus guttatus mgf006511m I 0.724
mgf020855m Mimulus guttatus mgf020855m I 0.724
Aquca_003_00899 Aquilegia coerulea Aquca_003_00899 I 0.724
MTR_8g100050 Medicago truncatula MTR_8g100050 I 0.724
mgf015308m Mimulus guttatus mgf015308m I 0.724
ARF2 Vitis vinifera VIT_17s0000g00320 I 0.724
POPTR_0015s11660 Populus trichocarpa POPTR_0015s11660 I 0.724
orange1.1g004106m.g Citrus sinensis orange1.1g004106m.g I 0.724
AMTR_s00021p00200760 Amborella trichopoda AMTR_s00021p00200760 I 0.724
POPTR_0012s10790 Populus trichocarpa POPTR_0012s10790 I 0.724
GLYMA03G41920 Glycine max GLYMA03G41920 I 0.724
MDP0000258032 Malus domestica MDP0000258032 I 0.724
Cla019614 Citrullus lanatus Cla019614 I 0.724
Solyc03g118290.2 Solanum lycopersicum Solyc03g118290.2 I 0.724
PK16974.1 Cannabis sativa PK16974.1 I 0.724
GSMUA_Achr10G12070_001 Musa acuminata GSMUA_Achr10G12070_001 I 0.724
GLYMA13G24240 Glycine max GLYMA13G24240 I 0.724
Gorai.008G210200 Gossypium raimondii Gorai.008G210200 I 0.724
Eucgr.B03551 Eucalyptus grandis Eucgr.B03551 I 0.724
gene06434-v1.0-hybrid Fragaria vesca gene06434-v1.0-hybrid I 0.724
GSMUA_Achr6G08090_001 Musa acuminata GSMUA_Achr6G08090_001 I 0.724
Gorai.001G054600 Gossypium raimondii Gorai.001G054600 I 0.724
GRMZM2G116557 Zea mays GRMZM2G116557 I 0.724
GLYMA07G32300 Glycine max GLYMA07G32300 I 0.724
Ciclev10014391m.g Citrus clementina Ciclev10014391m.g I 0.724
TCM_027113 Theobroma cacao TCM_027113 I 0.722
PDK_20s1477241g001 Phoenix dactylifera PDK_20s1477241g001 I 0.722
PDK_20s1651081g001 Phoenix dactylifera PDK_20s1651081g001 I 0.721
Traes_3DL_BC7A7E056 Triticum aestivum Traes_3DL_BC7A7E056 I 0.718
ARF2 Arabidopsis thaliana AT5G62000 D 0.714
Carubv10025860m.g Capsella rubella Carubv10025860m.g I 0.714
Bra035910 Brassica rapa Bra035910 I 0.714
F775_31280 Aegilops tauschii F775_31280 I 0.714
gene27792-v1.0-hybrid Fragaria vesca gene27792-v1.0-hybrid N 0.714
MDP0000412781 Malus domestica MDP0000412781 I 0.714
orange1.1g004792m.g Citrus sinensis orange1.1g004792m.g I 0.714
Bo2g161810 Brassica oleracea Bo2g161810 I 0.714
Solyc12g042070.1 Solanum lycopersicum Solyc12g042070.1 I 0.714
Bostr.26833s0038 Boechera stricta Bostr.26833s0038 I 0.714
TCM_014743 Theobroma cacao TCM_014743 I 0.714
Cagra.4553s0009 Capsella grandiflora Cagra.4553s0009 I 0.714
Gorai.010G157400 Gossypium raimondii Gorai.010G157400 I 0.714
ARF23 Oryza indica BGIOSGA033901 I 0.714
AMTR_s00057p00141830 Amborella trichopoda AMTR_s00057p00141830 I 0.714
29900.m001540 Ricinus communis 29900.m001540 I 0.714
cassava1599.valid.m1 Manihot esculenta cassava1599.valid.m1 I 0.714
cassava17839.valid.m1 Manihot esculenta cassava17839.valid.m1 I 0.714
Lus10043200.g Linum usitatissimum Lus10043200.g I 0.714
cassava17840.valid.m1 Manihot esculenta cassava17840.valid.m1 I 0.714
Pm024588 Prunus mume Pm024588 I 0.714
Lus10032541.g Linum usitatissimum Lus10032541.g I 0.714
Gorai.009G166100 Gossypium raimondii Gorai.009G166100 I 0.714
ETT Vitis vinifera VIT_10s0003g00420 I 0.714
Lus10013942.g Linum usitatissimum Lus10013942.g I 0.714
Ca_05681 Cicer arietinum Ca_05681 I 0.714
Gorai.011G030900 Gossypium raimondii Gorai.011G030900 I 0.714
MDP0000310875 Malus domestica MDP0000310875 I 0.714
cassava37256.valid.m1 Manihot esculenta cassava37256.valid.m1 I 0.714
Sb08g014320 Sorghum bicolor Sb08g014320 I 0.714
OBART11G15270 Oryza barthii OBART11G15270 I 0.714
OGLUM11G14710 Oryza glumaepatula OGLUM11G14710 I 0.714
OB11G21910 Oryza brachyantha OB11G21910 I 0.714
MTR_4g088210 Medicago truncatula MTR_4g088210 I 0.714
MTR_2g014770 Medicago truncatula MTR_2g014770 I 0.714
OLONG_022378 Oryza longistaminata OLONG_022378 I 0.714
OMERI11G12590 Oryza meridionalis OMERI11G12590 I 0.714
SapurV1A.0672s0210 Salix purpurea SapurV1A.0672s0210 I 0.714
SapurV1A.0774s0040 Salix purpurea SapurV1A.0774s0040 I 0.714
Pavir.Cb00753 Panicum virgatum Pavir.Cb00753 I 0.714
Thhalv10003641m.g Eutrema salsugineum Thhalv10003641m.g I 0.714
LPERR12G09930 Leersia perrieri LPERR12G09930 I 0.714
LPERR11G11950 Leersia perrieri LPERR11G11950 I 0.714
GLYMA15G08540 Glycine max GLYMA15G08540 I 0.714
GLYMA13G30750 Glycine max GLYMA13G30750 I 0.714
GLYMA08G01100 Glycine max GLYMA08G01100 I 0.714
GLYMA05G38540 Glycine max GLYMA05G38540 I 0.714
GLYMA03G36710 Glycine max GLYMA03G36710 N 0.714
GRMZM2G006042 Zea mays GRMZM2G006042 I 0.714
LjSGA_059669.1 Lotus japonicus LjSGA_059669.1 I 0.714
LjSGA_068216.1 Lotus japonicus LjSGA_068216.1 I 0.714
GRMZM2G352159 Zea mays GRMZM2G352159 I 0.714
GRMZM2G338259 Zea mays GRMZM2G338259 I 0.714
SapurV1A.0517s0240 Salix purpurea SapurV1A.0517s0240 I 0.714
ONIVA12G10760 Oryza nivara ONIVA12G10760 I 0.714
Bra010048 Brassica rapa Bra010048 I 0.714
Pavir.Ea03860 Panicum virgatum Pavir.Ea03860 I 0.714
Pavir.J11622 Panicum virgatum Pavir.J11622 I 0.714
PGSC0003DMG400014452 Solanum tuberosum PGSC0003DMG400014452 I 0.714
Bo9g014770 Brassica oleracea Bo9g014770 I 0.714
PRUPE_ppa001392mg Prunus persica PRUPE_ppa001392mg I 0.714
Pavir.Eb03734 Panicum virgatum Pavir.Eb03734 I 0.714
Sb03g044630 Sorghum bicolor Sb03g044630 I 0.714
gene29771-v1.0-hybrid Fragaria vesca gene29771-v1.0-hybrid I 0.714
Bo3g108130 Brassica oleracea Bo3g108130 I 0.714
ARF2 Arabidopsis lyrata scaffold_802850.1 I 0.714
ORGLA11G0129300 Oryza glaberrima ORGLA11G0129300 I 0.714
Si021216m.g Setaria italica Si021216m.g I 0.714
OPUNC11G12650 Oryza punctata OPUNC11G12650 I 0.714
ORUFI11G16290 Oryza rufipogon ORUFI11G16290 I 0.714
OS11G0523800 Oryza sativa OS11G0523800 I 0.714
PGSC0003DMG400014179 Solanum tuberosum PGSC0003DMG400014179 I 0.714
Si000340m.g Setaria italica Si000340m.g I 0.714
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I 0.711
PDK_20s1585531g001 Phoenix dactylifera PDK_20s1585531g001 I 0.704
Gorai.006G120400 Gossypium raimondii Gorai.006G120400 I 0.704
LjSGA_059323.1 Lotus japonicus LjSGA_059323.1 I 0.704
BRADI2G59480 Brachypodium distachyon BRADI2G59480 I 0.704
BRADI4G17410 Brachypodium distachyon BRADI4G17410 I 0.704
MDP0000179650 Malus domestica MDP0000179650 I 0.704
Lus10005264.g Linum usitatissimum Lus10005264.g I 0.704
PK18282.1 Cannabis sativa PK18282.1 I 0.704
Pavir.J08401 Panicum virgatum Pavir.J08401 I 0.704
MDP0000173151 Malus domestica MDP0000173151 I 0.704
LjSGA_103336.1 Lotus japonicus LjSGA_103336.1 I 0.704
F775_32662 Aegilops tauschii F775_32662 I 0.704
OPUNC05G23380 Oryza punctata OPUNC05G23380 I 0.704
OPUNC01G41560 Oryza punctata OPUNC01G41560 I 0.704
ONIVA05G27700 Oryza nivara ONIVA05G27700 I 0.704
OGLUM05G27420 Oryza glumaepatula OGLUM05G27420 I 0.704
OPUNC05G23400 Oryza punctata OPUNC05G23400 I 0.704
ORGLA05G0222700 Oryza glaberrima ORGLA05G0222700 I 0.704
PRUPE_ppa002065m1g Prunus persica PRUPE_ppa002065m1g I 0.704
PRUPE_ppa001557mg Prunus persica PRUPE_ppa001557mg I 0.704
GLYMA03G17450 Glycine max GLYMA03G17450 I 0.704
OGLUM01G46840 Oryza glumaepatula OGLUM01G46840 I 0.704
OBART05G25790 Oryza barthii OBART05G25790 I 0.704
GSMUA_Achr10G15100_001 Musa acuminata GSMUA_Achr10G15100_001 I 0.704
GRMZM2G030710 Zea mays GRMZM2G030710 I 0.704
GLYMA06G17320 Glycine max GLYMA06G17320 I 0.704
GLYMA04G37760 Glycine max GLYMA04G37760 I 0.704
GSMUA_AchrUn_randomG14770_001 Musa acuminata GSMUA_AchrUn_randomG14770_001 I 0.704
LPERR05G21420 Leersia perrieri LPERR05G21420 I 0.704
OB12G20020 Oryza brachyantha OB12G20020 I 0.704
MTR_4g021580 Medicago truncatula MTR_4g021580 I 0.704
MLOC_68907 Hordeum vulgare MLOC_68907 I 0.704
Sb09g028450 Sorghum bicolor Sb09g028450 I 0.704
Si021595m.g Setaria italica Si021595m.g I 0.704
cassava830.valid.m1 Manihot esculenta cassava830.valid.m1 I 0.704
cassava6009.valid.m1 Manihot esculenta cassava6009.valid.m1 I 0.704
cassava32762.m1 Manihot esculenta cassava32762.m1 I 0.704
30111.m000734 Ricinus communis 30111.m000734 I 0.704
Cucsa.114840 Cucumis sativus Cucsa.114840 I 0.704
Aquca_051_00062 Aquilegia coerulea Aquca_051_00062 I 0.704
evm.TU.supercontig_7.3 Carica papaya evm.TU.supercontig_7.3 I 0.704
evm.TU.supercontig_139.80 Carica papaya evm.TU.supercontig_139.80 I 0.704
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I 0.704
Eucgr.B02480 Eucalyptus grandis Eucgr.B02480 I 0.704
Pm031349 Prunus mume Pm031349 I 0.704
BGIOSGA020357 Oryza indica BGIOSGA020357 I 0.704
TCM_041071 Theobroma cacao TCM_041071 I 0.704
ARF9 Arabidopsis lyrata Al_scaffold_0007_1752 I 0.704
GLYMA01G25270 Glycine max GLYMA01G25270 I 0.704
TCM_005126 Theobroma cacao TCM_005126 I 0.704
TRAES3BF001100080CFD_g Triticum aestivum TRAES3BF001100080CFD_g I 0.704
ARF4 Vitis vinifera VIT_06s0004g03130 I 0.704
Pm000994 Prunus mume Pm000994 I 0.704
Ca_06352 Cicer arietinum Ca_06352 I 0.704
gene28545-v1.0-hybrid Fragaria vesca gene28545-v1.0-hybrid I 0.704
AMTR_s00016p00168950 Amborella trichopoda AMTR_s00016p00168950 I 0.701