Gorai.012G009000 (Gossypium raimondii)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Gorai.012G009000 T023400_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF8
M01697_2.00
Arabidopsis thaliana
NHTGTCGGN

NCCGACADN
PBM
Weirauch et al.(2014)
pTH8661
0.776 0.776
ARF5
M06701_2.00
Arabidopsis thaliana
WYTTGTCGGN

NCCGACAARW
Dap-seq
OMalley et al.(2016)
MP_col
0.765 0.765
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.012G009000.1 B3 137 239
Gorai.012G009000.2 B3 131 233
Gorai.012G009000.3 B3 137 239
Gorai.012G009000.4 B3 71 173

Links

Other B3 family TFs
Other Gossypium raimondii TFs

512 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CBG13351 Caenorhabditis briggsae CBG13351 N 0.000
CJA02799 Caenorhabditis japonica CJA02799 N 0.000
CRE02039 Caenorhabditis remanei CRE02039 N 0.000
DICVIV_08156 Dictyocaulus viviparus DICVIV_08156 N 0.000
swsn-7 Caenorhabditis elegans WBGene00007433 N 0.000
TELCIR_19453 Teladorsagia circumcincta TELCIR_19453 N 0.000