Gorai.013G039800 (Gossypium raimondii)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Gorai.013G039800 T023422_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
REM19
M06702_2.00 		Arabidopsis thaliana
TKWTTTTTTTTTKKY
RMMAAAAAAAAAWMA		 Dap-seq
OMalley et al.(2016)
REM19_col_a 		0.729 0.729
REM19
M06703_2.00 		Arabidopsis thaliana
NWBTTTTTTTTTTTTKKHHWH
DWDDMMAAAAAAAAAAAAVWN		 Dap-seq
OMalley et al.(2016)
REM19_colamp_a 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G039800.1 B3 131 226
Gorai.013G039800.2 B3 131 226
Gorai.013G039800.3 B3 103 198
Gorai.013G039800.4 B3 89 184
Gorai.013G039800.5 B3 131 226
Gorai.013G039800.6 B3 89 184

Links

Other B3 family TFs
Other Gossypium raimondii TFs

Invalid Input OrderBy

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action