Lus10012421.g (Linum usitatissimum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Lus10012421.g T023468_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF5
M06701_2.00
Arabidopsis thaliana
WYTTGTCGGN

NCCGACAARW
Dap-seq
OMalley et al.(2016)
MP_col
0.867 0.867
ARF8
M01697_2.00
Arabidopsis thaliana
NHTGTCGGN

NCCGACADN
PBM
Weirauch et al.(2014)
pTH8661
0.806 0.806
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10012421 B3 156 258

Links

Other B3 family TFs
Other Linum usitatissimum TFs

498 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BRADI2G57940 Brachypodium distachyon BRADI2G57940 N 0.000
ORGLA01G0347800 Oryza glaberrima ORGLA01G0347800 N 0.000
Pavir.J09064 Panicum virgatum Pavir.J09064 N 0.000
Sb03g043030 Sorghum bicolor Sb03g043030 N 0.000
Si000959m.g Setaria italica Si000959m.g N 0.000
TRAES3BF071100020CFD_g Triticum aestivum TRAES3BF071100020CFD_g N 0.000
TRAES3BF071100040CFD_g Triticum aestivum TRAES3BF071100040CFD_g N 0.000