Lus10012421.g (Linum usitatissimum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Lus10012421.g T023468_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF5
M06701_2.00
Arabidopsis thaliana
WYTTGTCGGN

NCCGACAARW
Dap-seq
OMalley et al.(2016)
MP_col
0.867 0.867
ARF8
M01697_2.00
Arabidopsis thaliana
NHTGTCGGN

NCCGACADN
PBM
Weirauch et al.(2014)
pTH8661
0.806 0.806
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10012421 B3 156 258

Links

Other B3 family TFs
Other Linum usitatissimum TFs

498 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CapteG109027 Capitella teleta CapteG109027 I 0.000
Ppa-pal-1 Pristionchus pacificus PPA02358 I 0.000
ANCCAN_03696 Ancylostoma caninum ANCCAN_03696 I 0.000
HPLM_0000060301 Haemonchus placei HPLM_0000060301 I 0.000
NECAME_06333 Necator americanus NECAME_06333 I 0.000
OESDEN_19696 Oesophagostomum dentatum OESDEN_19696 I 0.000
SVUK_0001504901 Strongylus vulgaris SVUK_0001504901 I 0.000
D917_04639 Trichinella nativa D917_04639 N 0.000
maker-nMf.1.1.scaf03287-augustus-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf03287-augustus-gene-0.5 N 0.000