Lus10034276.g (Linum usitatissimum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Lus10034276.g T023565_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAV1
M01646_2.00
Arabidopsis thaliana
NCACCTGAHN

NDTCAGGTGN
PBM
Weirauch et al.(2014)
pTH8592
0.802 0.802
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10034276 B3 47 160

Links

Other B3 family TFs
Other Linum usitatissimum TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.723
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.723
TRIUR3_24850 Triticum urartu TRIUR3_24850 I 0.733
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.771
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.733
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.733
Ca_01368 Cicer arietinum Ca_01368 I 0.752
Cla006845 Citrullus lanatus Cla006845 I 0.713
Cla017937 Citrullus lanatus Cla017937 I 0.713
Pm024248 Prunus mume Pm024248 I 0.723
30068.m002615 Ricinus communis 30068.m002615 I 0.723
30076.m004471 Ricinus communis 30076.m004471 I 0.733
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.713
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.723
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.733
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.723
Traes_4DL_872A1302F Triticum aestivum Traes_4DL_872A1302F I 0.703
Traes_4DL_59B1C9052 Triticum aestivum Traes_4DL_59B1C9052 I 0.733
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.713
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.723
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.707
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.713
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.713
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.733
TCM_005014 Theobroma cacao TCM_005014 I 0.723
TCM_015590 Theobroma cacao TCM_015590 I 0.713
Traes_1BL_60A56C455 Triticum aestivum Traes_1BL_60A56C455 I 0.733
Traes_1BL_B8B4C1FB6 Triticum aestivum Traes_1BL_B8B4C1FB6 I 0.713
Traes_1BL_F14523046 Triticum aestivum Traes_1BL_F14523046 I 0.733
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.764
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.821
Traes_3AS_2E5380A2A Triticum aestivum Traes_3AS_2E5380A2A I 0.723
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.723
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.713
mgf023686m Mimulus guttatus mgf023686m I 0.792
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.733
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.723
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.743
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.713
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.733
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.733
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.713
Pavir.Ea00485 Panicum virgatum Pavir.Ea00485 I 0.723
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.713
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.713
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.723
PK11025.1 Cannabis sativa PK11025.1 I 0.723
PK21157.1 Cannabis sativa PK21157.1 I 0.733
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.723
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.713
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.733
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.733
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.733
Aquca_072_00063 Aquilegia coerulea Aquca_072_00063 I 0.723
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.723
Cagra.11546s0001 Capsella grandiflora Cagra.11546s0001 I 0.792
Carubv10010429m.g Capsella rubella Carubv10010429m.g I 0.792
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.703
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.733
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.733
Eucgr.B03050 Eucalyptus grandis Eucgr.B03050 I 0.703
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.733
Eucgr.G02345 Eucalyptus grandis Eucgr.G02345 I 0.800
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.723
evm.TU.contig_29173.1 Carica papaya evm.TU.contig_29173.1 I 0.703
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.733
LjSGA_031920.1 Lotus japonicus LjSGA_031920.1 I 0.729
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.723
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.743
OBART04G22880 Oryza barthii OBART04G22880 I 0.713
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.733
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.752
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.713
OLONG_000415 Oryza longistaminata OLONG_000415 I 0.763
F775_22332 Aegilops tauschii F775_22332 I 0.701
F775_21293 Aegilops tauschii F775_21293 I 0.703
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.723
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.762
GRMZM2G018336 Zea mays GRMZM2G018336 I 0.740
OB05G32250 Oryza brachyantha OB05G32250 I 0.772
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.723
MLOC_38822 Hordeum vulgare MLOC_38822 I 0.743
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.723
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.733
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.733
OB01G36520 Oryza brachyantha OB01G36520 I 0.733
GRMZM2G065538 Zea mays GRMZM2G065538 I 0.740
OB02G35380 Oryza brachyantha OB02G35380 I 0.723
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.752
F775_21292 Aegilops tauschii F775_21292 I 0.734
F775_20738 Aegilops tauschii F775_20738 I 0.713
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.713
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.713
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.713
OS04G0581400 Oryza sativa OS04G0581400 I 0.713
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.723
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.723
MLOC_44012 Hordeum vulgare MLOC_44012 I 0.724
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.723
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.713
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.713
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.713
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.703
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.703
NGA1 Arabidopsis thaliana AT2G46870 N 0.703
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.713
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.703
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.723
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.703
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.707
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.703
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.713
MDP0000138163 Malus domestica MDP0000138163 N 0.703
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.703
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.723
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.703
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.723
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.700
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.703
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.713
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.703
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.713
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.723
Bra003482 Brassica rapa Bra003482 N 0.703
Bo3g039420 Brassica oleracea Bo3g039420 N 0.703
Bo3g001110 Brassica oleracea Bo3g001110 N 0.703
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.703
GSMUA_Achr5G20340_001 Musa acuminata GSMUA_Achr5G20340_001 N 0.703
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.703
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.713
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.713
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.713
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.713
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.723
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.723
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.713
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.713
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.703
OS02G0683500 Oryza sativa OS02G0683500 N 0.713
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.723
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.714
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.713
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.703
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.723
Si011823m.g Setaria italica Si011823m.g N 0.723
Si020241m.g Setaria italica Si020241m.g N 0.703
OS03G0120900 Oryza sativa OS03G0120900 N 0.713
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.713
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.703
Pm028725 Prunus mume Pm028725 N 0.723
OB03G11610 Oryza brachyantha OB03G11610 N 0.713
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.703
Si036864m.g Setaria italica Si036864m.g N 0.713
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.713
mgf019085m Mimulus guttatus mgf019085m N 0.713
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.713
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.713
OBART02G28100 Oryza barthii OBART02G28100 N 0.713
Cla014858 Citrullus lanatus Cla014858 N 0.707
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.723
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.713
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.723
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.701
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.713
VIT_08s0007g02810 Vitis vinifera VIT_08s0007g02810 N 0.703
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.713
OBART03G01650 Oryza barthii OBART03G01650 N 0.713
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.703