Lus10034276.g (Linum usitatissimum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Lus10034276.g T023565_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAV1
M01646_2.00
Arabidopsis thaliana
NCACCTGAHN

NDTCAGGTGN
PBM
Weirauch et al.(2014)
pTH8592
0.802 0.802
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10034276 B3 47 160

Links

Other B3 family TFs
Other Linum usitatissimum TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACAC_0000008501 Angiostrongylus cantonensis ACAC_0000008501 N 0.000
ACOC_0000493901 Angiostrongylus costaricensis ACOC_0000493901 N 0.000
ALUE_0000347301 Ascaris lumbricoides ALUE_0000347301 N 0.000
ANCCAN_14716 Ancylostoma caninum ANCCAN_14716 N 0.000
ANCCEY_13935 Ancylostoma ceylanicum ANCCEY_13935 N 0.000
ANCDUO_02893 Ancylostoma duodenale ANCDUO_02893 N 0.000
ASIM_0001085501 Anisakis simplex ASIM_0001085501 N 0.000
ASU_10686 Ascaris suum ASU_10686 N 0.000
Bm6679 Brugia malayi Bm6679 N 0.000
BXY_1053400 Bursaphelenchus xylophilus BXY_1053400 N 0.000
CBG08484 Caenorhabditis briggsae CBG08484 N 0.000
CBN22200 Caenorhabditis brenneri CBN22200 N 0.000
CJA15586 Caenorhabditis japonica CJA15586 N 0.000
CRE28107 Caenorhabditis remanei CRE28107 N 0.000
DME_0000295201 Dracunculus medinensis DME_0000295201 N 0.000
GPUH_0000076201 Gongylonema pulchrum GPUH_0000076201 N 0.000
grh-1 Caenorhabditis elegans WBGene00001707 N 0.000
HCOI00042900 Haemonchus contortus HCOI00042900 N 0.000
HPLM_0001248301 Haemonchus placei HPLM_0001248301 N 0.000
LOAG_15534 Loa loa LOAG_15534 N 0.000
nAv.1.0.1.g04294 Acanthocheilonema viteae nAv.1.0.1.g04294 N 0.000
NBR_0001111401 Nippostrongylus brasiliensis NBR_0001111401 I 0.000
nDi.2.2.2.g12190 Dirofilaria immitis nDi.2.2.2.g12190 N 0.000
nDi.2.2.2.g12300 Dirofilaria immitis nDi.2.2.2.g12300 I 0.000
NECAME_01451 Necator americanus NECAME_01451 N 0.000
nLs.2.1.2.g09328 Litomosoides sigmodontis nLs.2.1.2.g09328 N 0.000
nOo.2.0.1.g10305 Onchocerca ochengi nOo.2.0.1.g10305 N 0.000
nOo.2.0.1.g10313 Onchocerca ochengi nOo.2.0.1.g10313 N 0.000
nOo.2.0.1.g11935 Onchocerca ochengi nOo.2.0.1.g11935 N 0.000
OESDEN_24323 Oesophagostomum dentatum OESDEN_24323 N 0.000
PEQ_0000501101 Parascaris equorum PEQ_0000501101 N 0.000
PTRK_0001384100 Parastrongyloides trichosuri PTRK_0001384100 N 0.000
SMUV_0000990001 Syphacia muris SMUV_0000990001 N 0.000
SPAL_0001441800 Strongyloides papillosus SPAL_0001441800 N 0.000
SSTP_0000594700 Strongyloides stercoralis SSTP_0000594700 N 0.000
TCNE_0000897001 Toxocara canis TCNE_0000897001 N 0.000
TELCIR_08176 Teladorsagia circumcincta TELCIR_08176 N 0.000
TMUE_s0024003700 Trichuris muris TMUE_s0024003700 N 0.000
TMUE_s0040003800 Trichuris muris TMUE_s0040003800 N 0.000
WBGene00238278 Onchocerca volvulus WBGene00238278 N 0.000