MDP0000138163 (Malus domestica)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 MDP0000138163 T023594_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000138163 B3 121 226

Links

Other B3 family TFs
Other Malus domestica TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_005014 Theobroma cacao TCM_005014 I 0.871
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.871
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.871
Pm024248 Prunus mume Pm024248 I 0.871
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.871
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.871
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.871
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.871
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.871
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.861
TCM_015590 Theobroma cacao TCM_015590 I 0.861
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.861
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.861
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.861
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.861
30076.m004471 Ricinus communis 30076.m004471 I 0.851
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.851
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.851
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.851
Pm028725 Prunus mume Pm028725 N 0.851
MDP0000128295 Malus domestica MDP0000128295 N 0.851
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.842
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.842
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.842
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.842
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.842
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.842
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.840
MDP0000288808 Malus domestica MDP0000288808 N 0.832
PK11025.1 Cannabis sativa PK11025.1 I 0.832
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.832
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.822
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.822
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.822
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.822
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.822
NGA1 Arabidopsis thaliana AT2G46870 N 0.822
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.822
OB03G11610 Oryza brachyantha OB03G11610 N 0.822
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.822
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.822
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.822
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.822
Bra030497 Brassica rapa Bra030497 N 0.822
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.822
Bra040478 Brassica rapa Bra040478 I 0.822
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.822
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.822
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.822
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.822
Bo4g197410 Brassica oleracea Bo4g197410 I 0.822
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.822
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.822
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.822
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.821
OBART03G01650 Oryza barthii OBART03G01650 N 0.812
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.812
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.812
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.812
Cagra.1968s0048 Capsella grandiflora Cagra.1968s0048 N 0.812
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.812
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.812
Bostr.5325s0023 Boechera stricta Bostr.5325s0023 N 0.812
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.812
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.812
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.812
Bo3g001110 Brassica oleracea Bo3g001110 N 0.812
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.812
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.812
OS03G0120900 Oryza sativa OS03G0120900 N 0.812
Bo3g039420 Brassica oleracea Bo3g039420 N 0.812
Bo4g099000 Brassica oleracea Bo4g099000 N 0.812
Thhalv10008068m.g Eutrema salsugineum Thhalv10008068m.g N 0.812
Carubv10009540m.g Capsella rubella Carubv10009540m.g N 0.812
NGA3 Arabidopsis lyrata fgenesh2_kg.1__134__AT1G01030.1 N 0.812
NGA3 Arabidopsis thaliana AT1G01030 N 0.812
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.812
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.812
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.812
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.812
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.812
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.812
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.812
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.802
Si036864m.g Setaria italica Si036864m.g N 0.802
OS04G0581400 Oryza sativa OS04G0581400 I 0.802
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.802
OB02G35380 Oryza brachyantha OB02G35380 I 0.802
OBART04G22880 Oryza barthii OBART04G22880 I 0.802
Bra000434 Brassica rapa Bra000434 N 0.802
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.802
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.802
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.802
mgf023769m Mimulus guttatus mgf023769m N 0.802
Bo5g002790 Brassica oleracea Bo5g002790 N 0.802
Bo6g079210 Brassica oleracea Bo6g079210 N 0.802
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.802
Bra014415 Brassica rapa Bra014415 N 0.802
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.802
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.792
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.792
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.792
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.792
30068.m002615 Ricinus communis 30068.m002615 I 0.792
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.792
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.792
Ca_01368 Cicer arietinum Ca_01368 I 0.792
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.792
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.792
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.792
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.792
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.792
Bra003482 Brassica rapa Bra003482 N 0.792
Bo4g006900 Brassica oleracea Bo4g006900 N 0.782
Bo8g097490 Brassica oleracea Bo8g097490 N 0.782
Bra007646 Brassica rapa Bra007646 N 0.782
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N 0.782
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.782
Bra033294 Brassica rapa Bra033294 N 0.782
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.782
Bra004501 Brassica rapa Bra004501 N 0.782
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.782
Si011823m.g Setaria italica Si011823m.g N 0.782
PK21157.1 Cannabis sativa PK21157.1 I 0.782
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.775
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.772
OBART02G28100 Oryza barthii OBART02G28100 N 0.772
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.772
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.772
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.772
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.772
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.772
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.772
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.772
Cla005055 Citrullus lanatus Cla005055 N 0.772
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.772
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.772
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.772
OS02G0683500 Oryza sativa OS02G0683500 N 0.772
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.772
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I 0.772
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.768
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.762
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.762
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.762
TRIUR3_29732 Triticum urartu TRIUR3_29732 N 0.762
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.762
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.762
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I 0.762
Cla014858 Citrullus lanatus Cla014858 N 0.758
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.752
NGA2 Arabidopsis thaliana AT3G61970 N 0.752
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.752
OBART10G17010 Oryza barthii OBART10G17010 N 0.752
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.752
OS10G0537100 Oryza sativa OS10G0537100 N 0.752
Cla006845 Citrullus lanatus Cla006845 I 0.752
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.752
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.752
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.752
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.752
GSMUA_Achr5G20340_001 Musa acuminata GSMUA_Achr5G20340_001 N 0.743
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.743
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.737
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.733
mgf023686m Mimulus guttatus mgf023686m I 0.733
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.733
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.733
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.733
OB10G24100 Oryza brachyantha OB10G24100 N 0.731
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.727
TCM_022729 Theobroma cacao TCM_022729 N 0.727
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.724
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.723
Cla017937 Citrullus lanatus Cla017937 I 0.723
cassava19218.valid.m1 Manihot esculenta cassava19218.valid.m1 N 0.723
Cucsa.241440 Cucumis sativus Cucsa.241440 I 0.723
Si027632m.g Setaria italica Si027632m.g N 0.723
AMTR_s00018p00040300 Amborella trichopoda AMTR_s00018p00040300 N 0.723
Traes_2BL_5ECD53274 Triticum aestivum Traes_2BL_5ECD53274 N 0.717
F775_04153 Aegilops tauschii F775_04153 N 0.713
SapurV1A.0974s0140 Salix purpurea SapurV1A.0974s0140 N 0.713
Si039972m.g Setaria italica Si039972m.g N 0.713
POPTR_0016s07540 Populus trichocarpa POPTR_0016s07540 N 0.713
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.713
SapurV1A.1586s0010 Salix purpurea SapurV1A.1586s0010 N 0.713
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.713
BRADI4G25170 Brachypodium distachyon BRADI4G25170 N 0.713
MLOC_11014 Hordeum vulgare MLOC_11014 N 0.713
Carubv10010429m.g Capsella rubella Carubv10010429m.g I 0.713
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.713
Cagra.11546s0001 Capsella grandiflora Cagra.11546s0001 I 0.713
OB12G13420 Oryza brachyantha OB12G13420 N 0.713
OMERI12G01740 Oryza meridionalis OMERI12G01740 N 0.713
OPUNC11G03320 Oryza punctata OPUNC11G03320 N 0.713
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.713
PRUPE_ppa019539mg Prunus persica PRUPE_ppa019539mg I 0.707
GSMUA_Achr4G30170_001 Musa acuminata GSMUA_Achr4G30170_001 N 0.707
Traes_2DL_2128A95BD Triticum aestivum Traes_2DL_2128A95BD N 0.707
Pavir.Hb01814 Panicum virgatum Pavir.Hb01814 N 0.703
F775_02500 Aegilops tauschii F775_02500 N 0.703
Pavir.Ca00165 Panicum virgatum Pavir.Ca00165 N 0.703
Pavir.Ha01761 Panicum virgatum Pavir.Ha01761 N 0.703
Pavir.Cb02052 Panicum virgatum Pavir.Cb02052 N 0.703
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.703
mgf019085m Mimulus guttatus mgf019085m N 0.703
ORGLA11G0033600 Oryza glaberrima ORGLA11G0033600 N 0.703
Solyc09g010230.1 Solanum lycopersicum Solyc09g010230.1 N 0.703
Traes_4AL_4F2E6EF28 Triticum aestivum Traes_4AL_4F2E6EF28 N 0.703
Traes_4BS_5FECB39FA Triticum aestivum Traes_4BS_5FECB39FA N 0.703
Traes_4DS_E6210A614 Triticum aestivum Traes_4DS_E6210A614 N 0.703
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I 0.703
ORUFI11G03500 Oryza rufipogon ORUFI11G03500 N 0.703
PGSC0003DMG400008936 Solanum tuberosum PGSC0003DMG400008936 N 0.703
OS11G0156000 Oryza sativa OS11G0156000 N 0.703
BGIOSGA034469 Oryza indica BGIOSGA034469 N 0.703
Si020241m.g Setaria italica Si020241m.g N 0.703
Traes_5BL_B98E347A8 Triticum aestivum Traes_5BL_B98E347A8 N 0.703
Traes_5DL_CACDF70D6 Triticum aestivum Traes_5DL_CACDF70D6 N 0.703
OBART11G03590 Oryza barthii OBART11G03590 N 0.703
GSMUA_Achr6G13140_001 Musa acuminata GSMUA_Achr6G13140_001 N 0.703
Gorai.009G399000 Gossypium raimondii Gorai.009G399000 N 0.703
Lus10021326.g Linum usitatissimum Lus10021326.g N 0.703
Lus10034276.g Linum usitatissimum Lus10034276.g I 0.703
OGLUM11G03240 Oryza glumaepatula OGLUM11G03240 N 0.703
ONIVA07G22860 Oryza nivara ONIVA07G22860 N 0.703
OLONG_005139 Oryza longistaminata OLONG_005139 N 0.703
OMERI11G03310 Oryza meridionalis OMERI11G03310 N 0.703
OPUNC12G03300 Oryza punctata OPUNC12G03300 N 0.703
GRMZM2G328742 Zea mays GRMZM2G328742 N 0.700