orange1.1g004792m.g (Citrus sinensis)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 orange1.1g004792m.g T023722_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF2
M06714_2.00 		Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN		 Dap-seq
OMalley et al.(2016)
ARF2_col_v31 		0.980 0.980
ARF3
M00852_2.00 		Arabidopsis thaliana
NKGTYBNN
NNVRACMN		 PBM
Franco-Zorrilla et al.(2014)
ETTIN 		0.724 0.724
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g004792m B3 151 253
orange1.1g005618m B3 109 211
orange1.1g006544m B3 62 164
orange1.1g008608m B3 3 83

Links

Other B3 family TFs
Other Citrus sinensis TFs

Invalid Input OrderBy

478 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action