orange1.1g005491m.g (Citrus sinensis)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 orange1.1g005491m.g T023728_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF2
M06714_2.00 		Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN		 Dap-seq
OMalley et al.(2016)
ARF2_col_v31 		0.802 0.802
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g005491m B3 123 223
orange1.1g005575m B3 123 223
orange1.1g005675m B3 123 223
orange1.1g006471m B3 76 176
orange1.1g007282m B3 42 142
orange1.1g009328m B3 1 70

Links

Other B3 family TFs
Other Citrus sinensis TFs

Invalid Input OrderBy

333 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action