orange1.1g005491m.g (Citrus sinensis)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 orange1.1g005491m.g T023728_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF2
M06714_2.00 		Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN		 Dap-seq
OMalley et al.(2016)
ARF2_col_v31 		0.802 0.802
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g005491m B3 123 223
orange1.1g005575m B3 123 223
orange1.1g005675m B3 123 223
orange1.1g006471m B3 76 176
orange1.1g007282m B3 42 142
orange1.1g009328m B3 1 70

Links

Other B3 family TFs
Other Citrus sinensis TFs

333 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF140 Homo sapiens ENSG00000196387 D 0.000
ENSAMEG00000013369 Ailuropoda melanoleuca ENSAMEG00000013369 I 0.000
ZNF140 Otolemur garnettii ENSOGAG00000030665 I 0.000
ENSPANG00000001812 Papio anubis ENSPANG00000001812 I 0.000
ZNF140 Procavia capensis ENSPCAG00000014332 I 0.000
ENSPPYG00000005153 Pongo abelii ENSPPYG00000005153 I 0.000
ZNF140 Pan troglodytes ENSPTRG00000023960 I 0.000
ZNF140 Pteropus vampyrus ENSPVAG00000014537 I 0.000
ZNF140 Sorex araneus ENSSARG00000000083 I 0.000
ENSSTOG00000014531 Ictidomys tridecemlineatus ENSSTOG00000014531 I 0.000
ZNF140 Tursiops truncatus ENSTTRG00000004364 I 0.000
ZNF140 Vicugna pacos ENSVPAG00000011394 I 0.000
ENSP00000347755 Macaca fascicularis ENSP00000347755 I 0.000
ENSOARG00000008528 Ovis aries ENSOARG00000008528 I 0.000
ENSNLEG00000012479 Nomascus leucogenys ENSNLEG00000012479 I 0.000
ZNF140 Bos taurus ENSBTAG00000040072 I 0.000
ZNF140 Canis familiaris ENSCAFG00000030275 I 0.000
ZNF140 Callithrix jacchus ENSCJAG00000013104 I 0.000
ENSCSAG00000001815 Chlorocebus sabaeus ENSCSAG00000001815 I 0.000
ZNF140 Dasypus novemcinctus ENSDNOG00000019632 I 0.000
ZNF140 Equus caballus ENSECAG00000007427 I 0.000
ZNF140 Felis catus ENSFCAG00000024075 I 0.000
ZNF140 Gorilla gorilla ENSGGOG00000026442 I 0.000
ZNF140 Myotis lucifugus ENSMLUG00000009202 I 0.000
ZNF140 Macaca mulatta ENSMMUG00000003150 I 0.000
ENSMPUG00000002714 Mustela putorius furo ENSMPUG00000002714 I 0.000
Myotis_brandtii_ZNF140_10005227 Myotis brandtii Myotis_brandtii_ZNF140_10005227 I 0.000