Pavir.Ea03523 (Panicum virgatum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Pavir.Ea03523 T023836_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea03523.1.p B3 90 180
Pavir.Ea03523.1.p B3 593 672
Pavir.Ea03523.2.p B3 90 180
Pavir.Ea03523.2.p B3 575 668
Pavir.Ea03523.3.p B3 1 80
Pavir.Ea03523.3.p B3 475 568

Links

Other B3 family TFs
Other Panicum virgatum TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Si004140m.g Setaria italica Si004140m.g N 0.943
Sb03g043110 Sorghum bicolor Sb03g043110 N 0.868
GRMZM2G177244 Zea mays GRMZM2G177244 N 0.866
OB01G49710 Oryza brachyantha OB01G49710 N 0.821
OLONG_004138 Oryza longistaminata OLONG_004138 N 0.792
OMERI01G37990 Oryza meridionalis OMERI01G37990 N 0.792
OGLUM01G45160 Oryza glumaepatula OGLUM01G45160 N 0.772
BRADI2G58030 Brachypodium distachyon BRADI2G58030 N 0.772
OS01G0905400 Oryza sativa OS01G0905400 N 0.772
OBART01G40980 Oryza barthii OBART01G40980 N 0.771
ORUFI01G44300 Oryza rufipogon ORUFI01G44300 N 0.771
ORGLA01G0349100 Oryza glaberrima ORGLA01G0349100 N 0.771
BGIOSGA000302 Oryza indica BGIOSGA000302 N 0.764
ONIVA01G46020 Oryza nivara ONIVA01G46020 N 0.764
OPUNC01G39820 Oryza punctata OPUNC01G39820 N 0.752